RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 Q8N9G6 341 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 TP53I13Q8NBR0 393 aaPredicted RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 PMEPA1Q969W9 287 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 SLC45A3Q96JT2 553 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 GDAP1L1Q96MZ0 367 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 NOL6Q9H6R4 1146 aaKnown RBP12.26□□□□□ -0.45
DDX54-206ENST00000549271 FZD10Q9ULW2 581 aa12.26□□□□□ -0.45
DDX54-206ENST00000549271 SHANK1Q9Y566 2161 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 A0A1W2PQJ5 194 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TMEM191CA6NGB0 347 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 GOLGA6L19H0YKK7 550 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 CAPN5O15484 640 aaPredicted RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 NKX2-8O15522 239 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 BUB1O43683 1085 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 SEMA7AO75326 666 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TM7SF2O76062 418 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TMCC1O94876 653 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 IGSF6O95976 241 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TIMP2P16035 220 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 GLB1P16278 677 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 GNLYP22749 145 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 ELAVL4P26378 380 aaKnown RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 TNFRSF8P28908 595 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 DCTP40126 519 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 AIF1P55008 147 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 AGERQ15109 404 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 ALG11Q2TAA5 492 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TMEM52BQ4KMG9 183 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 CERCAMQ5T4B2 595 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 ATXN7L2Q5T6C5 722 aaPredicted RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 PHF19Q5T6S3 580 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 PPP1R2P3Q6NXS1 205 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 DCUN1D2Q6PH85 259 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 SLFN11Q7Z7L1 901 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 GKN2Q86XP6 184 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 GALNT11Q8NCW6 608 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 SYN2Q92777 582 aaPredicted RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 TAAR9Q96RI9 348 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 TRIM7Q9C029 511 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 ISCUQ9H1K1 167 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 CUEDC1Q9NWM3 386 aaPredicted RBP12.25□□□□□ -0.45
DDX54-206ENST00000549271 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 CAPN11Q9UMQ6 739 aa12.25□□□□□ -0.45
DDX54-206ENST00000549271 CELSR1Q9NYQ6 3014 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 TSPAN11A1L157 253 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 A1L4Q6 167 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 ANKRD62A6NC57 917 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 HGSO14964 777 aaPredicted RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 DUX1O43812 170 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 MMP20O60882 483 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 PRKCGP05129 697 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 FGF3P11487 239 aaPredicted RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 CTSEP14091 401 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 EPHB2P29323 1055 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 RHOAP61586 193 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 ZBED6P86452 979 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 ELP6Q0PNE2 266 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 CDC20Q12834 499 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 GRM3Q14832 879 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 PARP15Q460N3 678 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 OGFOD3Q6PK18 319 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 VPS36Q86VN1 386 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 HID1Q8IV36 788 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 CACNA2D3Q8IZS8 1091 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 UMODL1-AS1Q8N2C9 162 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 CXorf40AQ8TE69 158 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 CPLX3Q8WVH0 158 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 APOBEC4Q8WW27 367 aaKnown RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 TSACCQ96A04 125 aaPredicted RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 MBNL1Q9NR56 388 aaKnown RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 AKAP7Q9P0M2 348 aaPredicted RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
DDX54-206ENST00000549271 SETD2Q9BYW2 2564 aaPredicted RBP12.24□□□□□ -0.45
DDX54-206ENST00000549271 ZNF106Q9H2Y7 1883 aaKnown RBP12.23□□□□□ -0.45
DDX54-206ENST00000549271 VPS4BO75351 444 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 RASGRP1O95267 797 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 GYPCP04921 128 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 COL8A1P27658 744 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 OAS2P29728 719 aaKnown RBP12.23□□□□□ -0.45
DDX54-206ENST00000549271 HTR7P34969 479 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 B4GALNT1Q00973 533 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 HLTFQ14527 1009 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDX54-206ENST00000549271 TCEA2Q15560 299 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 LEKR1Q6ZMV7 388 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 HMCESQ96FZ2 354 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 DDA1Q9BW61 102 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 XPO4Q9C0E2 1151 aaKnown RBP12.23□□□□□ -0.45
DDX54-206ENST00000549271 KLC2Q9H0B6 622 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 CATSPERBQ9H7T0 1116 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 GPATCH2LQ9NWQ4 482 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 DONSONQ9NYP3 566 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 LHX3Q9UBR4 397 aa12.23□□□□□ -0.45
DDX54-206ENST00000549271 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
DDX54-206ENST00000549271 VPS4AQ9UN37 437 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms