RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PEX6Q13608 980 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 TCEAL1Q15170 157 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 GUSBP11Q6P575 273 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 LRRC69Q6ZNQ3 347 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 NLRP8Q86W28 1048 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 CBARPQ8N350 705 aaPredicted RBP11.4□□□□□ -0.58
BEST3-209ENST00000548658 PLA2G15Q8NCC3 412 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 CCNYQ8ND76 341 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 PIH1D2Q8WWB5 315 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 FGF11Q92914 225 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 FUBP1Q96AE4 644 aaKnown RBP11.4□□□□□ -0.58
BEST3-209ENST00000548658 HDAC11Q96DB2 347 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 RNF157Q96PX1 679 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 CHP1Q99653 195 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 TRIM5Q9C035 493 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 PNMA8BQ9ULN7 279 aaPredicted RBP11.4□□□□□ -0.58
BEST3-209ENST00000548658 RPL26L1Q9UNX3 145 aaKnown RBP11.4□□□□□ -0.58
BEST3-209ENST00000548658 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
BEST3-209ENST00000548658 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.59
BEST3-209ENST00000548658 MYLKQ15746 1914 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 LRRD1A4D1F6 860 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 TMEM202A6NGA9 273 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 TMX2-CTNND1H3BSU7 103 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 FZD6O60353 706 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 CSO75390 466 aaKnown RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 MYF5P13349 255 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 LSSP48449 732 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 DPTQ07507 201 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 PDK1Q15118 436 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 CNGA3Q16281 694 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 ISXQ2M1V0 245 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 DENND2CQ68D51 928 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 SARM1Q6SZW1 724 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 RBM44Q6ZP01 1051 aaKnown RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 TAF8Q7Z7C8 310 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 RHOT1Q8IXI2 618 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 SLC35F3Q8IY50 421 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 CCDC13Q8IYE1 715 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 PQLC3Q8N755 202 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 RAPGEF5Q92565 580 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 DTD2Q96FN9 168 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 ZNF578Q96N58 590 aaPredicted RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 TEX101Q9BY14 249 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 BRD8Q9H0E9 1235 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 CAAP1Q9H8G2 361 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 LUC7LQ9NQ29 371 aaKnown RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 DDX56Q9NY93 547 aaKnown RBP11.39□□□□□ -0.59
BEST3-209ENST00000548658 GULP1Q9UBP9 304 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 GPR34Q9UPC5 381 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 TTLL3Q9Y4R7 772 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 SHROOM3Q8TF72 1996 aa11.39□□□□□ -0.59
BEST3-209ENST00000548658 APC2O95996 2303 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 ZZEF1O43149 2961 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 A0A0J9YYE9 177 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 NPIPB15A6NHN6 443 aaPredicted RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 APOL1O14791 398 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 ZW10O43264 779 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 USP12O75317 370 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 DXOO77932 396 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 TRBC1P01850 177 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 PDHA1P08559 390 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 PNLIPP16233 465 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 GM2AP17900 193 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 TGM2P21980 687 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 EIF2S3P41091 472 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 ETV3P41162 512 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 ERVPABLB-1P60509 514 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 GBE1Q04446 702 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 PPIDQ08752 370 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 TBX2Q13207 712 aaPredicted RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 SPIDRQ14159 915 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 OGFOD3Q6PK18 319 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 Q6ZVL8 140 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 HSD11B1LQ7Z5J1 315 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 HEATR4Q86WZ0 1026 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 FAM46DQ8NEK8 389 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 SNIP1Q8TAD8 396 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 OR1E3Q8WZA6 343 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 PDXPQ96GD0 296 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 CCDC3Q9BQI4 270 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 TDRD1Q9BXT4 1180 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 ADGRE3Q9BY15 652 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 CYP4F12Q9HCS2 524 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 FGF22Q9HCT0 170 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 TRNAU1APQ9NX07 287 aaKnown RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 DTLQ9NZJ0 730 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 MOSPD1Q9UJG1 213 aa11.38□□□□□ -0.59
BEST3-209ENST00000548658 ANKRD11Q6UB99 2663 aaPredicted RBP11.38□□□□□ -0.59
BEST3-209ENST00000548658 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 PRSS38A1L453 326 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 PPP1R12AO14974 1030 aaPredicted RBP11.37□□□□□ -0.59
BEST3-209ENST00000548658 SPOPO43791 374 aa11.37□□□□□ -0.59
BEST3-209ENST00000548658 BRINP1O60477 761 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms