RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 IMP4Q96G21 291 aaKnown RBP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 PPP1R2P1Q96PQ5 205 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 FCRL5Q96RD9 977 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 RBM15Q96T37 977 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC7-226ENST00000547259 HEPHQ9BQS7 1158 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 GOLGA6AQ9NYA3 693 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 BTBD3Q9Y2F9 522 aa12.15□□□□□ -0.46
HDAC7-226ENST00000547259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-226ENST00000547259 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 E7EVH7 732 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 ANXA9O76027 345 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 PIGNO95427 931 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 METTL18O95568 372 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 POP4O95707 220 aaKnown RBP12.14□□□□□ -0.47
HDAC7-226ENST00000547259 PRNPP04156 253 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 C5AR1P21730 350 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 CA4P22748 312 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 SERPINA4P29622 427 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 SLC8A1P32418 973 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 ADCY8P40145 1251 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 LMAN1P49257 510 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 TERF1P54274 439 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 GEMP55040 296 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 SKOR1P84550 965 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 BCL2L1Q07817 233 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 OVGP1Q12889 678 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 CAMK2BQ13554 666 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 GRM3Q14832 879 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 CST6Q15828 149 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 PCSK7Q16549 785 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 MYLK3Q32MK0 819 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 TEX35Q5T0J7 233 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 NCEH1Q6PIU2 408 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 LRRC69Q6ZNQ3 347 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 SPATA22Q8NHS9 363 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 ARRDC2Q8TBH0 407 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 LRRC45Q96CN5 670 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 TUBGCP5Q96RT8 1024 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 TRIM31Q9BZY9 425 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 RAB17Q9H0T7 212 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 ATP13A3Q9H7F0 1226 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 ERVMER34-1Q9H9K5 563 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 NOD2Q9HC29 1040 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 AASDHPPTQ9NRN7 309 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 RAB6BQ9NRW1 208 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 UBP1Q9NZI7 540 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 NEU2Q9Y3R4 380 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 WASF2Q9Y6W5 498 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 FLNBO75369 2602 aaKnown RBP12.14□□□□□ -0.47
HDAC7-226ENST00000547259 PTPRQQ9UMZ3 2332 aa12.14□□□□□ -0.47
HDAC7-226ENST00000547259 MYLKQ15746 1914 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 PLXNA2O75051 1894 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 TK2O00142 265 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 PMPCBO75439 489 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 IL1BP01584 269 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 UGT2B4P06133 528 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 MMP2P08253 660 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 GKP32189 559 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 TNNT3P45378 269 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 PSMD8P48556 350 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 CCDC15Q0P6D6 951 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 MPP3Q13368 585 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 SLC14A2Q15849 920 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 CCDC157Q569K6 752 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 DHRS13Q6UX07 377 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 GDPD4Q6W3E5 623 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 IQCHQ86VS3 1027 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 CACTIN-AS1Q8N1I8 211 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 IFT43Q96FT9 208 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 ORAI3Q9BRQ5 295 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 CPEB1Q9BZB8 566 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 ETNK1Q9HBU6 452 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 FAM153AQ9UHL3 310 aa12.13□□□□□ -0.47
HDAC7-226ENST00000547259 AAR2Q9Y312 384 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 UTP11Q9Y3A2 253 aaKnown RBP12.13□□□□□ -0.47
HDAC7-226ENST00000547259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms