RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NDST2P52849 883 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 SLC18A1P54219 525 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 NEK10Q6ZWH5 1172 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 OR52K2Q8NGK3 314 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 REXO5Q96IC2 774 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 DGCR6LQ9BY27 220 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 SLC7A2P52569 658 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TAF5Q15542 800 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 MZT2BQ6NZ67 158 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SPESP1Q6UW49 350 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 DGCR14Q96DF8 476 aaKnown RBP12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SLC38A2Q96QD8 506 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
COL4A6-209ENST00000545689 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SIN3BO75182 1162 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 MPSTP25325 297 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 XKR6Q5GH73 641 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ZNF618Q5T7W0 954 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TPGS1Q6ZTW0 290 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 OR2T3Q8NH03 318 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SPRTNQ9H040 489 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-209ENST00000545689 CAB39LQ9H9S4 337 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 LRRC37A3O60309 1634 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 NDST3O95803 873 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 CDC25CP30307 473 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 GLUD2P49448 558 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TCEA2Q15560 299 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 CPSF7Q8N684 471 aaKnown RBP12.53□□□□□ -0.4
COL4A6-209ENST00000545689 BANPQ8N9N5 519 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TRPM4Q8TD43 1214 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 FZD10Q9ULW2 581 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 E9PAM4 449 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 H3BNX3 289 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 MATN3O15232 486 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 FEN1P39748 380 aaKnown RBP12.53□□□□□ -0.4
COL4A6-209ENST00000545689 USP4Q13107 963 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 HSDL1Q3SXM5 330 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 ARMC3Q5W041 872 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 OR52L1Q8NGH7 329 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 RERGLQ9H628 205 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 BRD9Q9H8M2 597 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 SQORQ9Y6N5 450 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 A0A1W2PQH9 124 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 TNNI3P19429 210 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 PFKPQ01813 784 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 GALNT18Q6P9A2 607 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 UNC5BQ8IZJ1 945 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 BPIFB6Q8NFQ5 453 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
COL4A6-209ENST00000545689 URADA6NGE7 173 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 PKMP14618 531 aaKnown RBP12.52□□□□□ -0.4
COL4A6-209ENST00000545689 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.4
COL4A6-209ENST00000545689 GBE1Q04446 702 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 CACNG1Q06432 222 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 HLA-DQA1Q5Y7H0 255 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.4
COL4A6-209ENST00000545689 FITM2Q8N6M3 262 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.4
COL4A6-209ENST00000545689 SPOCK2Q92563 424 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 BTBD9Q96Q07 612 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 OR52E6Q96RD3 313 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 B3GNT5Q9BYG0 378 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 TULP2O00295 520 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 RFXANKO14593 260 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 ADH1AP07327 375 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 UGT2B15P54855 530 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 MAXP61244 160 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 RINLQ6ZS11 566 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 FAM92BQ6ZTR7 304 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 PHC3Q8NDX5 983 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 BPIFA1Q9NP55 256 aa12.52□□□□□ -0.4
COL4A6-209ENST00000545689 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.4
COL4A6-209ENST00000545689 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
COL4A6-209ENST00000545689 PLIN3O60664 434 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 GNRH1P01148 92 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 FAM163BP0C2L3 166 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 ASPAP45381 313 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 GPR1P46091 355 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 STX4Q12846 297 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 ZNF846Q147U1 533 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
COL4A6-209ENST00000545689 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
COL4A6-209ENST00000545689 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
COL4A6-209ENST00000545689 CLP1Q92989 425 aaKnown RBP12.52□□□□□ -0.41
COL4A6-209ENST00000545689 TEFMQ96QE5 360 aaKnown RBP12.52□□□□□ -0.41
COL4A6-209ENST00000545689 SLC9A8Q9Y2E8 581 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms