RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PDK1	Q15118	436 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	DEFB133	Q30KQ1	61 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	ENPP7	Q6UWV6	458 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	MFSD7	Q6UXD7	560 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	ZNF765	Q7L2R6	523 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	TMTC1	Q8IUR5	882 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	CNTD1	Q8N815	330 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	CCNY	Q8ND76	341 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	OR56A4	Q8NGH8	313 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.41	□□□□□ -0.26
POLE-222	ENST00000545015	GLMN	Q92990	594 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	NUS1	Q96E22	293 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	LGMN	Q99538	433 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	MAK16	Q9BXY0	300 aa	Known RBP	13.41	□□□□□ -0.26
POLE-222	ENST00000545015	WDR26	Q9H7D7	661 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	KL	Q9UEF7	1012 aa		13.41	□□□□□ -0.26
POLE-222	ENST00000545015	TMEM202	A6NGA9	273 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	CAPN8	A6NHC0	703 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	BTNL10	A8MVZ5	291 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	PPP1R12A	O14974	1030 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-222	ENST00000545015	SPOP	O43791	374 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	KRT37	O76014	449 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	NDUFA10	O95299	355 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	MT-CO3	P00414	261 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	TNF	P01375	233 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	JCHAIN	P01591	159 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	MMP2	P08253	660 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	MYCLP1	P12525	358 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-222	ENST00000545015	ETV3	P41162	512 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	RPIA	P49247	311 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	PTS	Q03393	145 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	ITK	Q08881	620 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	ZBTB17	Q13105	803 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	C1orf61	Q13536	156 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	ARHGEF7	Q14155	803 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	TFDP2	Q14188	446 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	NR0B2	Q15466	257 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	SPA17	Q15506	151 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	CRTC1	Q6UUV9	634 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	BZW1	Q7L1Q6	419 aa	Known RBP	13.4	□□□□□ -0.26
POLE-222	ENST00000545015	HSD11B1L	Q7Z5J1	315 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	TSPAN33	Q86UF1	283 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	GAS2L3	Q86XJ1	694 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	GKN2	Q86XP6	184 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	MARCH9	Q86YJ5	346 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	HID1	Q8IV36	788 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	SLC35F3	Q8IY50	421 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	KATNAL2	Q8IYT4	538 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	PELI3	Q8N2H9	469 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	OR1E3	Q8WZA6	343 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	NAT6	Q93015	286 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	TSACC	Q96A04	125 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-222	ENST00000545015	TADA1	Q96BN2	335 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	FGF22	Q9HCT0	170 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	CLCA2	Q9UQC9	943 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	HEY1	Q9Y5J3	304 aa		13.4	□□□□□ -0.26
POLE-222	ENST00000545015	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.4	□□□□□ -0.26
POLE-222	ENST00000545015	GOLGA4	Q13439	2230 aa	Known RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015		A8MX80	341 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	KCNK1	O00180	336 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	PYGL	P06737	847 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	CTSE	P14091	401 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	NOP2	P46087	812 aa	Known RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	STC1	P52823	247 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	CLDN6	P56747	220 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	SKOR1	P84550	965 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	CDKN3	Q16667	212 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	TFDP3	Q5H9I0	405 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	LRRC66	Q68CR7	880 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	KCTD16	Q68DU8	428 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	OGFOD3	Q6PK18	319 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015		Q6ZVL8	140 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	RFX6	Q8HWS3	928 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	NRSN1	Q8IZ57	195 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	ARL10	Q8N8L6	244 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	WDR48	Q8TAF3	677 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	MDM1	Q8TC05	714 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	IFI44	Q8TCB0	444 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	SCG3	Q8WXD2	468 aa	Known RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	RNF25	Q96BH1	459 aa	Predicted RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	GRAMD1A	Q96CP6	724 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	NXPE2	Q96DL1	559 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	PDXP	Q96GD0	296 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	SCARF2	Q96GP6	870 aa	Predicted RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	LGR4	Q9BXB1	951 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	PCDH9	Q9HC56	1237 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.39	□□□□□ -0.27
POLE-222	ENST00000545015	CHKB	Q9Y259	395 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	HYOU1	Q9Y4L1	999 aa		13.39	□□□□□ -0.27
POLE-222	ENST00000545015	TDRD6	O60522	2096 aa	Known RBP	13.38	□□□□□ -0.27
POLE-222	ENST00000545015	RGSL1	A5PLK6	1076 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	TCEA3	O75764	348 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
POLE-222	ENST00000545015	SOD1	P00441	154 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	CELA2B	P08218	269 aa	Predicted RBP	13.38	□□□□□ -0.27
POLE-222	ENST00000545015	CTPS1	P17812	591 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	TGM2	P21980	687 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	EPHB1	P54762	984 aa		13.38	□□□□□ -0.27
POLE-222	ENST00000545015	CDK3	Q00526	305 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms