RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SYNCRIPO60506 623 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 KCNH1O95259 989 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 DHRS4L1P0CG22 281 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GRIA3P42263 894 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 MTTPP55157 894 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RGS21Q2M5E4 152 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 EML3Q32P44 896 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM98BQ52LJ0 330 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 IL27RAQ6UWB1 636 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ANKS3Q6ZW76 656 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 CYS1Q717R9 158 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 MILR1Q7Z6M3 343 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SMG8Q8ND04 991 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 OR52K2Q8NGK3 314 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 OLIG1Q8TAK6 271 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 EMILIN2Q9BXX0 1053 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PIF1Q9H611 641 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TIMMDC1Q9NPL8 285 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SLC7A8Q9UHI5 535 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TLR6Q9Y2C9 796 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SIPA1L1O43166 1804 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 A0A087WXM4 84 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RBM47A0AV96 593 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 SPTLC1O15269 473 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 INPP4BO15327 924 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TPD52L2O43399 206 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 SNNO75324 88 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 CAPN1P07384 714 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 LYNP07948 512 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ITGB6P18564 788 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RPL26P61254 145 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 PURAQ00577 322 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 PLIN5Q00G26 463 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ZNF33AQ06730 810 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GTF2H3Q13889 308 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 HECTD3Q5T447 861 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GPR158Q5T848 1215 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ARMC12Q5T9G4 340 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 FIG4Q92562 907 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 BHMTQ93088 406 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 VPS33AQ96AX1 596 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TSGA13Q96PP4 275 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 BDH2Q9BUT1 245 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 EBF3Q9H4W6 596 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 NMRK2Q9NPI5 230 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 CRTAC1Q9NQ79 661 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RSL24D1Q9UHA3 163 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 CIDEBQ9UHD4 219 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 LEF1Q9UJU2 399 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 ANAPC2Q9UJX6 822 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 POMPQ9Y244 141 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 LRRC42Q9Y546 428 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 BRWD3Q6RI45 1802 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 A0A0J9YYE9 177 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PNMA8CA0A1B0GUJ8 204 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM25AB3EWG3 89 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM25CB3EWG5 89 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM25GB3EWG6 89 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 NRP1O14786 923 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SYN3O14994 580 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 URODP06132 367 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 DGKAP23743 735 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PEX2P28328 305 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ABL2P42684 1182 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 IL12RB1P42701 662 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RPL5P46777 297 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 MAPKAPK2P49137 400 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 CXCR3P49682 368 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 AQP4P55087 323 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 IL10RBQ08334 325 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SMARCB1Q12824 385 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ATP1A4Q13733 1029 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TRIP4Q15650 581 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 RNF220Q5VTB9 566 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RSBN1Q5VWQ0 802 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 LYPLAL1Q5VWZ2 237 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RGMBQ6NW40 437 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 CDHR3Q6ZTQ4 885 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ZCCHC7Q8N3Z6 543 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 NSMCE2Q96MF7 247 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GPR22Q99680 433 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 HOPXQ9BPY8 73 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 KIFC1Q9BW19 673 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 DPY30Q9C005 99 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TMEM245Q9H330 911 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 BPIFA1Q9NP55 256 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 DDX18Q9NVP1 670 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 EURLQ9NYK6 297 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FNIP2Q9P278 1114 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 AGO1Q9UL18 857 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 SCN9AQ15858 1988 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 EVPLLA8MZ36 301 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 H3BMM5 538 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ZNF197O14709 1029 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GABRDO14764 452 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 AREL1O15033 823 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 IGSF6O95976 241 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GOT2P00505 430 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms