RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ZDHHC18Q9NUE0 388 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 ZFR2Q9UPR6 939 aaKnown RBP13.1□□□□□ -0.31
DDX11-227ENST00000544652 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
DDX11-227ENST00000544652 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PIKFYVEQ9Y2I7 2098 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3DA0A087WVF3 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3IA0A087WXS9 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3EA0A087X179 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 C1orf232A0A0U1RR37 186 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 ESYT3A0FGR9 886 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 MROH6A6NGR9 719 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 A8MX80 341 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3LB9A6J9 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 E7ESA3 106 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 GOLGA8MH3BSY2 632 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 AURKAO14965 403 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 HRO43593 1189 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 LDB2O43679 373 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 RNGTTO60942 597 aaKnown RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 RPP40O75818 363 aaKnown RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 PCDH8O95206 1070 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 CLDN7O95471 211 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 C1SP09871 688 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 RHOXF2BP0C7M4 288 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 ELFN1P0C7U0 828 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3HP0C7X1 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PIRTP0C851 137 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TPH1P17752 444 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 BCKDHBP21953 392 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 LIG3P49916 1009 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 STC1P52823 247 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PPP2CBP62714 309 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PPP2CAP67775 309 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 ARHGEF7Q14155 803 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 C6orf132Q5T0Z8 1188 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 KIAA0895LQ68EN5 471 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3CQ6IPX1 549 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 CYP2U1Q7Z449 544 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 GLT6D1Q7Z4J2 308 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TECPR1Q7Z6L1 1165 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 TBC1D3Q8IZP1 549 aaPredicted RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.31
DDX11-227ENST00000544652 FBXO25Q8TCJ0 367 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 BLOC1S5Q8TDH9 187 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 CXorf40AQ8TE69 158 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 SIGLEC10Q96LC7 697 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 COQ10AQ96MF6 247 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 RHOXF2Q9BQY4 288 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 WRAP53Q9BUR4 548 aaKnown RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 GPR174Q9BXC1 333 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PHACTR1Q9C0D0 580 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 IL22Q9GZX6 179 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 DUSP15Q9H1R2 295 aaPredicted RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 C6orf106Q9H6K1 298 aaPredicted RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 BFARQ9NZS9 450 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 IL17CQ9P0M4 197 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 NFKBIL1Q9UBC1 381 aaPredicted RBP13.09□□□□□ -0.31
DDX11-227ENST00000544652 RIMKLBQ9ULI2 386 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 PI4KAP42356 2102 aa13.09□□□□□ -0.31
DDX11-227ENST00000544652 A0A0U1RQS6 177 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 A0A1W2PQU0 124 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 RGSL1A5PLK6 1076 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 METTL12A8MUP2 240 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 NEMP1O14524 444 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 MMP20O60882 483 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 NDUFS2O75306 463 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 AVILO75366 819 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 TM7SF2O76062 418 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 CRTAMO95727 393 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 IGHV4-34P06331 123 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 C6P13671 934 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ADRA1DP25100 572 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 MGAT1P26572 445 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ECHS1P30084 290 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 PDE1BQ01064 536 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 CUL1Q13616 776 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 FGL2Q14314 439 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 POU6F1Q14863 301 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ZNF284Q2VY69 593 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 PCID2Q5JVF3 399 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 SEL1L3Q68CR1 1132 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 HSD11B1LQ7Z5J1 315 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 IFT20Q8IY31 132 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
DDX11-227ENST00000544652 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.32
DDX11-227ENST00000544652 RUBCNQ92622 972 aa13.08□□□□□ -0.32
DDX11-227ENST00000544652 PEX13Q92968 403 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms