RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PAPOLBQ9NRJ5 636 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 BCLAF3A2AJT9 711 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 TRIM38O00635 465 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 ZNF37AP17032 561 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 HTR1BP28222 390 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 CXCR3P49682 368 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 INO80DQ53TQ3 878 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 APLFQ8IW19 511 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 TMEM192Q8IY95 271 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 ZNF655Q8N720 491 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 LRRC57Q8N9N7 239 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 PPP1R14AQ96A00 147 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SERHL2Q9H4I8 314 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SERHLQ9NQF3 203 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 STMN3Q9NZ72 180 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 CLUHO75153 1309 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 TSPAN19P0C672 248 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 FAM182AQ5T1J6 154 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 FAM46CQ5VWP2 391 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 TXNDC11Q6PKC3 985 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 UXS1Q8NBZ7 420 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 TSSK3Q96PN8 268 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 ZNF232Q9UNY5 417 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 OR10H2O60403 315 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 KRT75O95678 551 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 IFNGR2P38484 337 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 RXRGP48443 463 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SLC7A2P52569 658 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 CYP4F2P78329 520 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 PPIDQ08752 370 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 BIKQ13323 160 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 ZNF544Q6NX49 715 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 RAVER1Q8IY67 606 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 ZNF567Q8N184 647 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 NOCTQ9UK39 431 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 TMCO1Q9UM00 188 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 CHURC1-FNTBB4DL54 471 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 RFXANKO14593 260 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 PRMT5O14744 637 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 RPP40O75818 363 aaKnown RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 OR6A2O95222 327 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 COPZ1P61923 177 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 STX4Q12846 297 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 IRAK1BP1Q5VVH5 260 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 NEK10Q6ZWH5 1172 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 C12orf50Q8NA57 414 aaPredicted RBP12.81□□□□□ -0.36
CHD4-211ENST00000544484 ING5Q8WYH8 240 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 RBPJLQ9UBG7 517 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 CD84Q9UIB8 345 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 PLLPQ9Y342 182 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 TIMM22Q9Y584 194 aa12.81□□□□□ -0.36
CHD4-211ENST00000544484 TRBV23OR9-2A0A075B6M9 112 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 QSOX1O00391 747 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 SEPT4O43236 478 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 TSC22D2O75157 780 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ADH1CP00326 375 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ZBTB48P10074 688 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 LAG3P18627 525 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PARP15Q460N3 678 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 GK5Q6ZS86 529 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 C16orf62Q7Z3J2 963 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CPNE8Q86YQ8 564 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CENPIQ92674 756 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 EFR3BQ9Y2G0 817 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 ZFP37Q9Y6Q3 630 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 A0A087WXM4 84 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 GLYATL1P3A0A0U1RQE8 302 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 TPSB2P20231 275 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CES1P23141 567 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 TPSAB1Q15661 275 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CCL14Q16627 93 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 TAPT1Q6NXT6 567 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 PRSS55Q6UWB4 352 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 NELL1Q92832 810 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 CD101Q93033 1021 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 REXO4Q9GZR2 422 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 OR10H1Q9Y4A9 318 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 A0A0G2JLL6 359 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 RHOQP17081 205 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 PRRT2Q7Z6L0 340 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 ULK2Q8IYT8 1036 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 NKD2Q969F2 451 aaPredicted RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 VPS35Q96QK1 796 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 AARSD1Q9BTE6 412 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 ARL8BQ9NVJ2 186 aa12.8□□□□□ -0.36
CHD4-211ENST00000544484 GOLGA4Q13439 2230 aaKnown RBP12.8□□□□□ -0.36
CHD4-211ENST00000544484 C5orf60A6NFR6 353 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms