RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MPP1Q00013 466 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 SMAD2Q15796 467 aaKnown RBP30.46■■■□□ 2.47
CCM2-219ENST00000544363 TPRG1Q6ZUI0 275 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 SH2D5Q6ZV89 423 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 STK40Q8N2I9 435 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 GPR150Q8NGU9 434 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 OR4L1Q8NH43 312 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 OR8D1Q8WZ84 308 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 ALKBH8Q96BT7 664 aaKnown RBP30.46■■■□□ 2.47
CCM2-219ENST00000544363 EID2BQ96D98 161 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 KLF6Q99612 283 aaPredicted RBP30.46■■■□□ 2.47
CCM2-219ENST00000544363 RHOJQ9H4E5 214 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 DKK3Q9UBP4 350 aa30.46■■■□□ 2.47
CCM2-219ENST00000544363 SPECC1L-ADORA2AF8WAN1 911 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 HNRNPLP14866 589 aaKnown RBP eCLIP30.45■■■□□ 2.471e-7■□□□□ 10.3
CCM2-219ENST00000544363 CTHP32929 405 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 PPARDQ03181 441 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 ZNF805Q5CZA5 627 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 FSTL4Q6MZW2 842 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 AFTPHQ6ULP2 937 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 ZC3HC1Q86WB0 502 aaKnown RBP30.45■■■□□ 2.47
CCM2-219ENST00000544363 CILP2Q8IUL8 1156 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 OTUD6BQ8N6M0 293 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 MDM1Q8TC05 714 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 C19orf43Q9BQ61 176 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 BPIFA1Q9NP55 256 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 SUN2Q9UH99 717 aa30.45■■■□□ 2.47
CCM2-219ENST00000544363 SMG5Q9UPR3 1016 aaKnown RBP30.45■■■□□ 2.47
CCM2-219ENST00000544363 ANTXRLA6NF34 631 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 NPIPB15A6NHN6 443 aaPredicted RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 GOLGA8RI6L899 631 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 PRPF4O43172 522 aaKnown RBP eCLIP30.44■■■□□ 2.461e-6■■□□□ 13.8
CCM2-219ENST00000544363 SPAG7O75391 227 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 PRNPP04156 253 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 PYGBP11216 843 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 SLC18A2Q05940 514 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 E2F5Q15329 346 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 GALNT7Q86SF2 657 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 DNASE1L2Q92874 299 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 VPS39Q96JC1 886 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 MARCH4Q9P2E8 410 aaPredicted RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 H7C0S8 307 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 CD3EAPO15446 510 aaKnown RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 RRP9O43818 475 aaKnown RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 CLDN7O95471 211 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 ELAVL3Q14576 367 aaKnown RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 LEXMQ3ZCV2 418 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 TXNDC11Q6PKC3 985 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 CRTC1Q6UUV9 634 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 TMIEQ8NEW7 156 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 ATXN7L3BQ96GX2 97 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 SGSM3Q96HU1 749 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 ACOX2Q99424 681 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 CATSPERZQ9NTU4 200 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 FKBPLQ9UIM3 349 aa30.44■■■□□ 2.46
CCM2-219ENST00000544363 MTO1Q9Y2Z2 717 aaKnown RBP30.44■■■□□ 2.46
CCM2-219ENST00000544363 EYSQ5T1H1 3165 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 K7EQS6 105 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 TYROBPO43914 113 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 CHN1P15882 459 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 ABCG1P45844 678 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 LEPRP48357 1165 aaKnown RBP30.43■■■□□ 2.46
CCM2-219ENST00000544363 MPP2Q14168 576 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 MRNIPQ6NTE8 343 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 TSPAN33Q86UF1 283 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 RALGPS2Q86X27 583 aaPredicted RBP30.43■■■□□ 2.46
CCM2-219ENST00000544363 DCLK2Q8N568 766 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 DEFB123Q8N688 67 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 BANPQ8N9N5 519 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 C8orf33Q9H7E9 229 aaPredicted RBP30.43■■■□□ 2.46
CCM2-219ENST00000544363 ZDHHC4Q9NPG8 344 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 CACNA2D2Q9NY47 1150 aa30.43■■■□□ 2.46
CCM2-219ENST00000544363 COL4A2P08572 1712 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 TCF20Q9UGU0 1960 aaKnown RBP30.42■■■□□ 2.46
CCM2-219ENST00000544363 FAM47DPA6NHR8 397 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 NPC1O15118 1278 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 ALDOAP04075 364 aaKnown RBP30.42■■■□□ 2.46
CCM2-219ENST00000544363 TIMP2P16035 220 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 CD151P48509 253 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 ENPP2Q13822 863 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 EZH1Q92800 747 aaPredicted RBP30.42■■■□□ 2.46
CCM2-219ENST00000544363 FAM129BQ96TA1 746 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 GPR22Q99680 433 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 FBXO6Q9NRD1 293 aaPredicted RBP30.42■■■□□ 2.46
CCM2-219ENST00000544363 PPM1HQ9ULR3 514 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 STON1Q9Y6Q2 735 aa30.42■■■□□ 2.46
CCM2-219ENST00000544363 C16orf96A6NNT2 1141 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 A8MX80 341 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 UPK3BL1B0FP48 263 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 UPK3BL2E5RIL1 263 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 HAUS5O94927 633 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 EPHX1P07099 455 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 OGNP20774 298 aaKnown RBP30.41■■■□□ 2.46
CCM2-219ENST00000544363 MDH1P40925 334 aaKnown RBP30.41■■■□□ 2.46
CCM2-219ENST00000544363 CCNFP41002 786 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 SLC18A1P54219 525 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 FASTKD1Q53R41 847 aaKnown RBP30.41■■■□□ 2.46
CCM2-219ENST00000544363 ZNF513Q8N8E2 541 aaPredicted RBP30.41■■■□□ 2.46
CCM2-219ENST00000544363 ACMSDQ8TDX5 336 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 ISL2Q96A47 359 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms