RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 PARGQ86W56 976 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 NAXDQ8IW45 347 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 KLHDC8BQ8IXV7 354 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 SDR16C5Q8N3Y7 309 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 BTN2A2Q8WVV5 523 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 RTP4Q96DX8 246 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 DTD2Q96FN9 168 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 SPATA13Q96N96 652 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 APOOQ9BUR5 198 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CEP41Q9BYV8 373 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 RAD18Q9NS91 495 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CA5BQ9Y2D0 317 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 KCNK3O14649 394 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 KCNN4O15554 427 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 NME1P15531 152 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 TSHRP16473 764 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 NFKB1P19838 968 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 KELP23276 732 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 HTR1BP28222 390 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 EPHA8P29322 1005 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 TNNT3P45378 269 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 BLKP51451 505 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 STC1P52823 247 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 GEMP55040 296 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 PRPSAP1Q14558 356 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 CCNG2Q16589 344 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 LRRC66Q68CR7 880 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 KDELC1Q6UW63 502 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 HSD11B1LQ7Z5J1 315 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 ASCC3Q8N3C0 2202 aaKnown RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 LPCAT1Q8NF37 534 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 KNL1Q8NG31 2342 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 BAHD1Q8TBE0 780 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 NUS1Q96E22 293 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 MYOCQ99972 504 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 TRABDQ9H4I3 376 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 HACD3Q9P035 362 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 RSPH14Q9UHP6 348 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 PCOLCE2Q9UKZ9 415 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 TTC7AQ9ULT0 858 aaPredicted RBP13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 COQ6Q9Y2Z9 468 aa13.77□□□□□ -0.21
TNFSF13B-206ENST00000542136 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 NEMP2A6NFY4 417 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 A8MX80 341 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 H3BM21 787 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 SH3BP5O60239 455 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 PMPCBO75439 489 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 ITGAVP06756 1048 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 ALPIP09923 528 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 CTPS1P17812 591 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 HLA-DPA1P20036 260 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 WNT3AP56704 352 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 KIAA1024LP59773 190 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 PDE1CQ14123 709 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 OASLQ15646 514 aaKnown RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 PARP6Q2NL67 630 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 Q6ZVL8 140 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 LRRC45Q96CN5 670 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 OXNAD1Q96HP4 312 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 PBKQ96KB5 322 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 MRGPRX2Q96LB1 330 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 TEX101Q9BY14 249 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 ARNT2Q9HBZ2 717 aa13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 NFKBIL1Q9UBC1 381 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 DRG1Q9Y295 367 aaKnown RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 R3HDM2Q9Y2K5 976 aaKnown RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 COL5A1P20908 1838 aaPredicted RBP13.76□□□□□ -0.21
TNFSF13B-206ENST00000542136 TP53BP1Q12888 1972 aaPredicted RBP13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 C1orf232A0A0U1RR37 186 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 GOLGA6CA6NDK9 693 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 CES2O00748 559 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 PSMD3O43242 534 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 LIASO43766 372 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 KIF5CO60282 957 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 PIAS2O75928 621 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 CLDN7O95471 211 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 FGF1P05230 155 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 GOLGA6DP0CG33 693 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 DGKAP23743 735 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 HMGCLP35914 325 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 ETV3P41162 512 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 SPINT3P49223 89 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 NOVA1P51513 510 aaKnown RBP13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 DCDC1P59894 354 aa13.75□□□□□ -0.21
TNFSF13B-206ENST00000542136 SEMG2Q02383 582 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms