RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 ZNF730Q6ZMV8 503 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 UBE2R2Q712K3 238 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 CCDC80Q76M96 950 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 NANOGNBQ7Z5D8 188 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 HCAR2Q8TDS4 363 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 STK32AQ8WU08 396 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 PMM1Q92871 262 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 RIT1Q92963 219 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 TESCQ96BS2 214 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 ARHGAP20Q9P2F6 1191 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 POLR3HQ9Y535 204 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 NEDD8-MDP1E9PL57 170 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 MDM4O15151 490 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 LRIG2O94898 1065 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 CXCL14O95715 111 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 MC4RP32245 332 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 INHBEP58166 350 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 PUS10Q3MIT2 529 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 SPDYCQ5MJ68 293 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 THOC7Q6I9Y2 204 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 ATG14Q6ZNE5 492 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 GALNTL5Q7Z4T8 443 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 MAP4K3Q8IVH8 894 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 CLP1Q92989 425 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 COPS8Q99627 209 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 GLIS2Q9BZE0 524 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 PLA2R1Q13018 1463 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 DBIP07108 87 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 ALAS2P22557 587 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 CDK9P50750 372 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 CCL23P55773 120 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 LSM3P62310 102 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 SF1Q15637 639 aaKnown RBP10.75□□□□□ -0.69
GABRB3-204ENST00000541819 WDR59Q6PJI9 974 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 FAM131AQ6UXB0 335 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 FAM151BQ6UXP7 276 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 UNC5AQ6ZN44 842 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 ATP6V1C2Q8NEY4 427 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 DNASE1L2Q92874 299 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 XPR1Q9UBH6 696 aa10.75□□□□□ -0.69
GABRB3-204ENST00000541819 SIGLEC16A6NMB1 481 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CBX6O95503 412 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 IDO1P14902 403 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ABCG1P45844 678 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 NPNTQ6UXI9 565 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 OR4L1Q8NH43 312 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ETNPPLQ8TBG4 499 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ABCC3O15438 1527 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 REREQ9P2R6 1566 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CCDC85CA6NKD9 419 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 FKTNO75072 461 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 NT5EP21589 574 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ADRA1DP25100 572 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CXCL9Q07325 125 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 IL18R1Q13478 541 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PYHIN1Q6K0P9 492 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 GET4Q7L5D6 327 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 C12orf56Q8IXR9 622 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 GPC2Q8N158 579 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SFRP1Q8N474 314 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ELMO3Q96BJ8 720 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 HSFY1Q96LI6 401 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CHCHD6Q9BRQ6 235 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 RIOX1Q9H6W3 641 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 EQTNQ9NQ60 294 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PFDN2Q9UHV9 154 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 LOC110117498-PIK3R3F6TDL0 507 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 TPD52L2O43399 206 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 AHCYL1O43865 530 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 C9P02748 559 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 LINC00032P0C843 101 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SAGP10523 405 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PPP3R1P63098 170 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CELF3Q5SZQ8 465 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CPTPQ5TA50 214 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 VANGL1Q8TAA9 524 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PIK3R3Q92569 461 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ABCG8Q9H221 673 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PCDHGB5Q9Y5G0 923 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ADCY10Q96PN6 1610 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 USP31Q70CQ4 1352 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CLDN4O14493 209 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 RASGRP1O95267 797 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PTPRAP18433 802 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ZNF143P52747 638 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 TMEM63BQ5T3F8 832 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PSRC1Q6PGN9 363 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 DCLRE1AQ6PJP8 1040 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PIWIL2Q8TC59 973 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 DHRS1Q96LJ7 313 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PRKAB1Q9Y478 270 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms