RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CDKN2DP55273 166 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 CDH15P55291 814 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 NME5P56597 212 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 HERVK_113P63132 956 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 PLOD1Q02809 727 aaPredicted RBP12.31□□□□□ -0.44
NPC1-202ENST00000540608 GPR158Q5T848 1215 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 FAM110BQ8TC76 370 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 ASB2Q96Q27 587 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 GAD1Q99259 594 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 PARK7Q99497 189 aaKnown RBP12.31□□□□□ -0.44
NPC1-202ENST00000540608 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
NPC1-202ENST00000540608 SAC3D1A6NKF1 404 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 HSD17B1P14061 328 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 IL10P22301 178 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MYF6P23409 242 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ESRRGP62508 458 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SH3BP2P78314 561 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 PRAMEP78395 509 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 INPP5AQ14642 412 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 CCL14Q16627 93 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 KIF19Q2TAC6 998 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ZBED5Q49AG3 693 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 FAM219BQ5XKK7 198 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 GPR141Q7Z602 305 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 CBR4Q8N4T8 237 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 RTL3Q8N8U3 475 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 PNPLA1Q8N8W4 532 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 LPPQ93052 612 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 IMP4Q96G21 291 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 FEM1CQ96JP0 617 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ACBD6Q9BR61 282 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MFSD1Q9H3U5 465 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 DNAJC15Q9Y5T4 150 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 DHRS12A0PJE2 317 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MROH6A6NGR9 719 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 NR5A2O00482 541 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 NUP107P57740 925 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 BNIP2Q12982 314 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SPPL2CQ8IUH8 684 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SLC15A3Q8IY34 581 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SCAMP5Q8TAC9 235 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SLC45A3Q96JT2 553 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 AGPAT4Q9NRZ5 378 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SMOXQ9NWM0 555 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SFMBT1Q9UHJ3 866 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 NYNRINQ9P2P1 1898 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 hCG_2014768A0A024R1R8 64 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TRIM64A6NGJ6 449 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 E9PAM4 449 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ZNF701M0R085 212 aaPredicted RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 TNPO2O14787 897 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 PEX11BO96011 259 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 RPL9P32969 192 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 GALK1P51570 392 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 RENBPP51606 427 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 CDH13P55290 713 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MERTKQ12866 999 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 VPS26BQ4G0F5 336 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TTC33Q6PID6 262 aaPredicted RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 LDB1Q86U70 411 aaPredicted RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 CROCCP3Q8IVE0 287 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MIER2Q8N344 545 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.3□□□□□ -0.447e-7■■■■■ 42.2
NPC1-202ENST00000540608 PTERQ96BW5 349 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 SMOC2Q9H3U7 446 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 IL1RL2Q9HB29 575 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MPP6Q9NZW5 540 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
NPC1-202ENST00000540608 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
NPC1-202ENST00000540608 WASH4PA8MWX3 477 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CDK14O94921 469 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 GNAO1P09471 354 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 FASP25445 335 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CPT1AP50416 773 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 SPATS1Q496A3 300 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 MORN1Q5T089 497 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 OR6P1Q8NGX9 317 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CASP10Q92851 521 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 HDAC10Q969S8 669 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 C9orf16Q9BUW7 83 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 ADI1Q9BV57 179 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 TMLHEQ9NVH6 421 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CMTM6Q9NX76 183 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms