RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 PARP15Q460N3 678 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 TAF3Q5VWG9 929 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 FAM129CQ86XR2 697 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 NAGSQ8N159 534 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 CCDC185Q8N715 623 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 BMPERQ8N8U9 685 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 CENPIQ92674 756 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 RTP4Q96DX8 246 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 PDP2Q9P2J9 529 aa11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 UBA2Q9UBT2 640 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-209ENST00000539982 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 KRT7P08729 469 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 MYCLP1P12525 358 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 GM2AP17900 193 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TCN2P20062 427 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 AK4P27144 223 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 SERPINA4P29622 427 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 CSF2RBP32927 897 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 PTPN9P43378 593 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 MLLT10P55197 1068 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 HDAC4P56524 1084 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 POLR2LP62875 67 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 NOMO3P69849 1222 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 MC2RQ01718 297 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 ABHD18Q0P651 414 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 DPY19L2P1Q6NXN4 242 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 DPPA4Q7L190 304 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TIPARPQ7Z3E1 657 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 SLFN11Q7Z7L1 901 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 PHLDB2Q86SQ0 1253 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 SRLQ86TD4 932 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 UNC5BQ8IZJ1 945 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 UMODL1-AS1Q8N2C9 162 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 PELI3Q8N2H9 469 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TEX19Q8NA77 164 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 PATE1Q8WXA2 126 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 NTAN1Q96AB6 310 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 ECHDC3Q96DC8 303 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 ZPBPQ9BS86 351 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TEX101Q9BY14 249 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TRIT1Q9H3H1 467 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 ATP13A3Q9H7F0 1226 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 FBXO8Q9NRD0 319 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TMEM9Q9P0T7 183 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 TP53TG5Q9Y2B4 290 aa11.63□□□□□ -0.55
CLSTN3-209ENST00000539982 ITPR2Q14571 2701 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 C2CD4BA6NLJ0 364 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 A8MX80 341 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 AGFG2O95081 481 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 MAN1A1P33908 653 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 GNPDA1P46926 289 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 GPLD1P80108 840 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 CTBSQ01459 385 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 ACOX1Q15067 660 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 FHL5Q5TD97 284 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 NAA35Q5VZE5 725 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 TCTN3Q6NUS6 607 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 C16orf46Q6P387 395 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 SLC30A9Q6PML9 568 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 CEACAM20Q6UY09 585 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 KDELC2Q7Z4H8 507 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 NOP9Q86U38 636 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 PYROXD2Q8N2H3 581 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 JOSD2Q8TAC2 188 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 STARD8Q92502 1023 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 COQ10AQ96MF6 247 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 CTRCQ99895 268 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 FRMD8Q9BZ67 464 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 SUDS3Q9H7L9 328 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 CATSPERBQ9H7T0 1116 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 PDFQ9HBH1 243 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 PRDM8Q9NQV8 689 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 PHPT1Q9NRX4 125 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 RWDD2AQ9UIY3 292 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 SUFUQ9UMX1 484 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 TMEM184BQ9Y519 407 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 KCTD3Q9Y597 815 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 ST14Q9Y5Y6 855 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 KCNMB2Q9Y691 235 aa11.62□□□□□ -0.55
CLSTN3-209ENST00000539982 MKRN2OSH3BPM6 223 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 J3KR12 359 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 PRAMEF11O60813 436 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 VPS4BO75351 444 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 MMEP08473 750 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 MMP8P22894 467 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 ERCC5P28715 1186 aaPredicted RBP11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 ADCY8P40145 1251 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 RGRP47804 291 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 BCL2L1Q07817 233 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 ARHGAP22Q7Z5H3 698 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 HEATR4Q86WZ0 1026 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
CLSTN3-209ENST00000539982 AHCYL2Q96HN2 611 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms