RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF534Q76KX8 674 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 GPR149Q86SP6 731 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 CLEC14AQ86T13 490 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 NLRP8Q86W28 1048 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 ZDHHC17Q8IUH5 632 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 C10orf107Q8IVU9 208 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 GPR65Q8IYL9 337 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PQLC3Q8N755 202 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 POU5F2Q8N7G0 328 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 ANKFN1Q8N957 763 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PDPRQ8NCN5 879 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 TNIP2Q8NFZ5 429 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PNPT1Q8TCS8 783 aaKnown RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 DQX1Q8TE96 717 aaKnown RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 SLC22A17Q8WUG5 538 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 ASB9Q96DX5 294 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 IGSF21Q96ID5 467 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 FAR2Q96K12 515 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 RANBP9Q96S59 729 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 CDRT15Q96T59 188 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PRPF18Q99633 342 aaKnown RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 KIFC3Q9BVG8 833 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 CALN1Q9BXU9 219 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 EMILIN2Q9BXX0 1053 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 OXCT2Q9BYC2 517 aaPredicted RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 ANKRD60Q9BZ19 345 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 HAPLN2Q9GZV7 340 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 DRC3Q9H069 523 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 XYLT2Q9H1B5 865 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 LRRC4Q9HBW1 653 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 MAGEE1Q9HCI5 957 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PCDH12Q9NPG4 1184 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 TBC1D23Q9NUY8 699 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 DDX18Q9NVP1 670 aaKnown RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 NSMCE4AQ9NXX6 385 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 RCOR3Q9P2K3 495 aaPredicted RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 WNT16Q9UBV4 365 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 MARCOQ9UEW3 520 aaPredicted RBP7.7□□□□□ -1.18
CCDC60-204ENST00000539847 GNPTGQ9UJJ9 305 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 AKT3Q9Y243 479 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 RNF11Q9Y3C5 154 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PRKAB1Q9Y478 270 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 SLC30A1Q9Y6M5 507 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 WDR87Q6ZQQ6 2873 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 PTPRJQ12913 1337 aa7.7□□□□□ -1.18
CCDC60-204ENST00000539847 GPR179Q6PRD1 2367 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 IGKV6-21A0A0C4DH24 114 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 LOC100653049A0A140TA62 436 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ARHGEF37A1IGU5 675 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 FAM221BA6H8Z2 402 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 MEI4A8MW99 385 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 PAPSS1O43252 624 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ZBTB14O43829 449 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 GREM1O60565 184 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 AVILO75366 819 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 E2F6O75461 281 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 PIAS1O75925 651 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 KRT34O76011 436 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TNNC2P02585 160 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 APRTP07741 180 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 P4HA1P13674 534 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 EDN3P14138 238 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 RBL1P28749 1068 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TYK2P29597 1187 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 GPD2P43304 727 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ASPAP45381 313 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 RPL14P50914 215 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 GALK1P51570 392 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 CLCN3P51790 818 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 RPL10AP62906 217 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 COG7P83436 770 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ILF2Q12905 390 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ART3Q13508 389 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 BMPR2Q13873 1038 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TRIM25Q14258 630 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 EMC2Q15006 297 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 KYAT1Q16773 422 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 KCNT1Q5JUK3 1230 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 INTS11Q5TA45 600 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 TRMT10BQ6PF06 316 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 IYDQ6PHW0 289 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 LPCAT2Q7L5N7 544 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 LILRA2Q8N149 483 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 LZTR1Q8N653 840 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF513Q8N8E2 541 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 DTWD2Q8NBA8 298 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ZUFSPQ96AP4 578 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 RMND5BQ96G75 393 aaPredicted RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 CNBD2Q96M20 576 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 QKIQ96PU8 341 aaKnown RBP eCLIP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 PKP2Q99959 881 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 ADPGKQ9BRR6 497 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 MRPL4Q9BYD3 311 aaKnown RBP7.69□□□□□ -1.18
CCDC60-204ENST00000539847 IL22Q9GZX6 179 aa7.69□□□□□ -1.18
CCDC60-204ENST00000539847 C10orf88Q9H8K7 445 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms