RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KRT27Q7Z3Y8 459 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GPR141Q7Z602 305 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TADA2BQ86TJ2 420 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TDRPQ86YL5 185 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARFGAP1Q8N6T3 406 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 FRMD1Q8N878 549 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GPATCH11Q8N954 259 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 C8orf58Q8NAV2 365 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 HJURPQ8NCD3 748 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SLC44A5Q8NCS7 719 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RDM1Q8NG50 284 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RASSF8Q8NHQ8 419 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 HASPINQ8TF76 798 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 FKBP10Q96AY3 582 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MSI2Q96DH6 328 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LRFN5Q96NI6 719 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 DUSP26Q9BV47 211 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 NUF2Q9BZD4 464 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 WNT5BQ9H1J7 359 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ALDH8A1Q9H2A2 487 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 UBQLN3Q9H347 655 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TRPV4Q9HBA0 871 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GLOD4Q9HC38 313 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 WDR6Q9NNW5 1121 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 BPIFA1Q9NP55 256 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PDE7BQ9NP56 450 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARPP21Q9UBL0 812 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CIDEBQ9UHD4 219 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ING1Q9UK53 422 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 AGO1Q9UL18 857 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ADAMTS5Q9UNA0 930 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ATP6V0A2Q9Y487 856 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 DOCK7Q96N67 2140 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARAP1Q96P48 1450 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 FEZF1A0PJY2 475 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LILRA5A6NI73 299 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LRRC72A6NJI9 287 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LRRC3CA6NJW4 275 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 J3KR12 359 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ZC3H11AO75152 810 aaKnown RBP eCLIP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 WISP2O76076 250 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TOMM70O94826 608 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MT-CYBP00156 380 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GLUD1P00367 558 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 EBLN1P0CF75 366 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CTSAP10619 480 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CD38P28907 300 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PGM1P36871 562 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RFX5P48382 616 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 GLUD2P49448 558 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RAB28P51157 221 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CDH15P55291 814 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 HERV-K104P61576 105 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 HNRNPKP61978 463 aaKnown RBP eCLIP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PITX1P78337 314 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RPP30P78346 268 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 OLR1P78380 273 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CSTF3Q12996 717 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SRSF9Q13242 221 aaKnown RBP eCLIP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CRHR2Q13324 411 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TSTA3Q13630 321 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ITGA7Q13683 1181 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ALKBH1Q13686 389 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ME3Q16798 604 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ASTE1Q2TB18 679 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 LEXMQ3ZCV2 418 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM119Q4V9L6 283 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RAB6CQ53S08 254 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 C10orf76Q5T2E6 689 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TMEM268Q5VZI3 342 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 KAZNQ674X7 775 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 IL20RBQ6UXL0 311 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ZNF782Q6ZMW2 699 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 MCM10Q7L590 875 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 C1orf210Q8IVY1 113 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARHGAP12Q8IWW6 846 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CADM3Q8N126 398 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARL14EPQ8N8R7 260 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 NAT8LQ8N9F0 302 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 IL17RCQ8NAC3 791 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 KDM1BQ8NB78 822 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 OR4N2Q8NGD1 307 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RITA1Q96K30 269 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ZMAT2Q96NC0 199 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PLEKHG4BQ96PX9 1271 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 FAM118BQ9BPY3 351 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 C19orf43Q9BQ61 176 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SDF4Q9BRK5 362 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 CADM1Q9BY67 442 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 WDR11Q9BZH6 1224 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 RAB6CQ9H0N0 254 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ACTR5Q9H9F9 607 aaPredicted RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 USP29Q9HBJ7 922 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 PFDN4Q9NQP4 134 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 KRT84Q9NSB2 600 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 TRNAU1APQ9NX07 287 aaKnown RBP1.08□□□□□ -2.24
HIF1A-204ENST00000539097 ARL15Q9NXU5 204 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 FLRT3Q9NZU0 649 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 SENP1Q9P0U3 644 aa1.08□□□□□ -2.24
HIF1A-204ENST00000539097 DNAJB4Q9UDY4 337 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms