RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CSHL1Q14406 222 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 CAPRIN1Q14444 709 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM35AQ86V20 835 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 AGBL3Q8NEM8 1001 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 S100ZQ8WXG8 99 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 FKBP10Q96AY3 582 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 ERLEC1Q96DZ1 483 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 CTRCQ99895 268 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 TRMOQ9BU70 441 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 KLHL25Q9H0H3 589 aa18.62■□□□□ 0.57
SFSWAP-207ENST00000538548 ZFC3H1O60293 1989 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 ERCC2P18074 760 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CAPN3P20807 821 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC12A2P55011 1212 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 POU4F1Q01851 419 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 TRIM32Q13049 653 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 OTUD1Q5VV17 481 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CLEC6AQ6EIG7 209 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 PKN3Q6P5Z2 889 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CRTC3Q6UUV7 619 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 METTL7BQ6UX53 244 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 LINC00523Q86TU6 105 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 ANKRD13BQ86YJ7 626 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC7A5P1Q8MH63 180 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 OSCP1Q8WVF1 389 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 LRRC58Q96CX6 371 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CCDC97Q96F63 343 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CDHR5Q9HBB8 845 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 CHST12Q9NRB3 414 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 MTHFD1P11586 935 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 TGM1P22735 817 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 PCID2Q5JVF3 399 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 RBM48Q5RL73 367 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 NANOGNBQ7Z5D8 188 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM149B1Q96BN6 582 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 VAT1Q99536 393 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 LPIN3Q9BQK8 851 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 FUNDC2Q9BWH2 189 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 UBP1Q9NZI7 540 aa18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 WARS2Q9UGM6 360 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-207ENST00000538548 SYNJ2BP-COX16A0A087WUM0 186 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 H0Y858 1186 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 CRHBPP24387 322 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 ADORA2BP29275 332 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 SKIV2LQ15477 1246 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 KYAT1Q16773 422 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 AGAP9Q5VTM2 703 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 UNC93AQ86WB7 457 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 PTRH1Q86Y79 214 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC22A9Q8IVM8 553 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 SPARTQ8N0X7 666 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 VMP1Q96GC9 406 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 BDH2Q9BUT1 245 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 HERC2P3Q9BVR0 1158 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 NFKBIZQ9BYH8 718 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 TPK1Q9H3S4 243 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 GSTO2Q9H4Y5 243 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 TLR9Q9NR96 1032 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 COX16Q9P0S2 106 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 ANKMY1Q9P2S6 941 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 ERVK-11Q9UQG0 969 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 PCDHA9Q9Y5H5 950 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 DGKBQ9Y6T7 804 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC1A2P43004 574 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 PLK1P53350 603 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 PITX1P78337 314 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 UGT3A2Q3SY77 523 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 COQ5Q5HYK3 327 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 BTBD8Q5XKL5 378 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 TMEM214Q6NUQ4 689 aaKnown RBP18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 CYP2U1Q7Z449 544 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 MIER2Q8N344 545 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 HSFY1Q96LI6 401 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 C3orf30Q96M34 536 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 AKTIPQ9H8T0 292 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 HACL1Q9UJ83 578 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 SCN1AP35498 2009 aa18.6■□□□□ 0.57
SFSWAP-207ENST00000538548 C16orf96A6NNT2 1141 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 UBFD1O14562 309 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 SHMT2P34897 504 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 CLCN3P51790 818 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 HNRNPFP52597 415 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 FAM187BQ17R55 369 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 Q3C1V9 767 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 IQSEC1Q6DN90 963 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 TBPL2Q6SJ96 375 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC16A12Q6ZSM3 486 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 R3HCC1LQ7Z5L2 792 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 NT5C3BQ969T7 300 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 HDAC11Q96DB2 347 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 PHF21BQ96EK2 531 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 OTUD5Q96G74 571 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 TEKT5Q96M29 485 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 SLC30A3Q99726 388 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 TRIM54Q9BYV2 358 aa18.59■□□□□ 0.57
SFSWAP-207ENST00000538548 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms