RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 MARK4Q96L34 752 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OR52E6Q96RD3 313 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SYT15Q9BQS2 421 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CADM1Q9BY67 442 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CKLFQ9UBR5 152 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ABCG2Q9UNQ0 655 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MEMO1Q9Y316 297 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 NEURL4Q96JN8 1562 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 TCRBV5S4A2TA0A5A2 114 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 AQP12BA6NM10 295 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 TSPAN4O14817 238 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZMPSTE24O75844 475 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MMP10P09238 476 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SLC5A3P53794 718 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MPP1Q00013 466 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 CMPK2Q5EBM0 449 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZNF280DQ6N043 979 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 AQP12AQ8IXF9 295 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SLC34A3Q8N130 599 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 UBR7Q8N806 425 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OR52K1Q8NGK4 314 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SPATA20Q8TB22 786 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MRPS31Q92665 395 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZC3H10Q96K80 434 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 NPAS2Q99743 824 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 NMUR2Q9GZQ4 415 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SLCO1B3Q9NPD5 702 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 GPRC5CQ9NQ84 441 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CFL2Q9Y281 166 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 LYVE1Q9Y5Y7 322 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 FADS2P1A8MWK0 482 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 KLRC4O43908 158 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PEX11AO75192 247 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 UGT2B17O75795 530 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 NTSR2O95665 410 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 MSL3P1P0C860 447 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ZSCAN5DPP0CG00 497 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PRKAR2AP13861 404 aaKnown RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 SLC7A1P30825 629 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 RBM34P42696 430 aaKnown RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 CTSKP43235 329 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 RARRES1P49788 294 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PNLIPRP1P54315 467 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 GTF2BQ00403 316 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 KLHL22Q53GT1 634 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PAMR1Q6UXH9 720 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 SMIM5Q71RC9 77 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 HPS6Q86YV9 775 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 OR8H3Q8N146 312 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 OR5K1Q8NHB7 308 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 MGME1Q9BQP7 344 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 OSBPL7Q9BZF2 842 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 EBF3Q9H4W6 596 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 LRRC4CQ9HCJ2 640 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PNPOQ9NVS9 261 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 POLR1DQ9Y2S0 133 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 GRIP1Q9Y3R0 1128 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ELOVL7A1L3X0 281 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 SLITRK3O94933 977 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ASLP04424 464 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 SCNN1BP51168 640 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 CYP2U1Q7Z449 544 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 IRF2BP2Q7Z5L9 587 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ZSWIM2Q8NEG5 633 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 KCTD4Q8WVF5 259 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ANKRA2Q9H9E1 313 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 PRAMEF33A0A0G2JMD5 474 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 TFECO14948 347 aaPredicted RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 PRAMEF10O60809 474 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 CALCAP01258 141 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 DNAJB1P25685 340 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 EPHA3P29320 983 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 OR1E1P30953 314 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 MNDAP41218 407 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 TPTEP56180 551 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 FMO1Q01740 532 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 BIKQ13323 160 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PPM1LQ5SGD2 360 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 ZNF772Q68DY9 489 aaPredicted RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 DEFB106AQ8N104 65 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 OR4A15Q8NGL6 344 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 CCDC107Q8WV48 283 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 SHC3Q92529 594 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 LPGAT1Q92604 370 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 CCDC3Q9BQI4 270 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 NUSAP1Q9BXS6 441 aaKnown RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 LHX5Q9H2C1 402 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 RASSF1Q9NS23 344 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 UXTQ9UBK9 157 aaPredicted RBP6.92□□□□□ -1.3
SORT1-209ENST00000538502 ZNRF3Q9ULT6 936 aa6.92□□□□□ -1.3
SORT1-209ENST00000538502 PCDHGC3Q9UN70 934 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms