RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CNSTQ6PJW8 725 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 NAPRTQ6XQN6 538 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 CENPLQ8N0S6 344 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-210ENST00000538120 PPP1R14CQ8TAE6 165 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 FEM1CQ96JP0 617 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 GPR78Q96P69 363 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TRIB3Q96RU7 358 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 MGME1Q9BQP7 344 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 SPON2Q9BUD6 331 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 C11orf49Q9H6J7 331 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 IL21Q9HBE4 155 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 NMRAL1Q9HBL8 299 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 PDP2Q9P2J9 529 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ANKRD6Q9Y2G4 727 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 DNAJC16Q9Y2G8 782 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 TBC1D30Q9Y2I9 924 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
CLIP1-210ENST00000538120 ILVBLA1L0T0 632 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CCL22O00626 93 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 PRRG1O14668 218 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 PDE5AO76074 875 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 SPATA31D3P0C874 917 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 GJA8P48165 433 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 RPS6KA3P51812 740 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 TAS2R39P59534 338 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 VEPH1Q14D04 833 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CYTH1Q15438 398 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 GSTA3Q16772 222 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 SFT2D3Q587I9 215 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CXorf57Q6NSI4 855 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 SPATA31D4Q6ZUB0 917 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CHST9Q7L1S5 443 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 C16orf59Q7L2K0 433 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 MAVSQ7Z434 540 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 HIPK4Q8NE63 616 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 PSKH2Q96QS6 385 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 NR1H4Q96RI1 486 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 PNPOQ9NVS9 261 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CHD5Q8TDI0 1954 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 TARM1B6A8C7 271 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 GFRA2O00451 464 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 KIAA0355O15063 1070 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 EPOP01588 193 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 LINC00271P0C7V0 271 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CR2P20023 1033 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 GRK2P25098 689 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 LEPRP48357 1165 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 PPP3CCP48454 512 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 EPHB1P54762 984 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 OXCT1P55809 520 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 RAB10P61026 200 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 ACVR1Q04771 509 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 TUBB3Q13509 450 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 TAF12Q16514 161 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 RBM20Q5T481 1227 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 KIAA0408Q6ZU52 694 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 CCDC124Q96CT7 223 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 OMDQ99983 421 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 UBA2Q9UBT2 640 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 SEPT3Q9UH03 358 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 TLK1Q9UKI8 766 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 ADAMTS6Q9UKP5 1117 aa10.77□□□□□ -0.69
CLIP1-210ENST00000538120 RUVBL2Q9Y230 463 aaKnown RBP10.77□□□□□ -0.69
CLIP1-210ENST00000538120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 TCAF2A6NFQ2 919 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ZNF195O14628 629 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SCAMP3O14828 347 aaKnown RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 CD160O95971 181 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 RHOCP08134 193 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SERPINA6P08185 405 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 GRIA2P42262 883 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 EPHB3P54753 998 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SLC12A1Q13621 1099 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 GALNT3Q14435 633 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 PTPRCAPQ14761 206 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 DNAL1Q4LDG9 190 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 C6orf163Q5TEZ5 329 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ISLR2Q6UXK2 745 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SETD3Q86TU7 594 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 PIWIL2Q8TC59 973 aaKnown RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 ELMO2Q96JJ3 720 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SPATA16Q9BXB7 569 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 MFSD1Q9H3U5 465 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 TASP1Q9H6P5 420 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 MARCH4Q9P2E8 410 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 OR51F1A6NGY5 319 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 NRG2O14511 850 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-210ENST00000538120 SLC7A4O43246 635 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 OLFM2O95897 454 aa10.76□□□□□ -0.69
CLIP1-210ENST00000538120 FGF1P05230 155 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms