RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	MORN5	Q5VZ52	161 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	NAA16	Q6N069	864 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710		Q6ZTK2	550 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	LINC00346	Q8IVM7	164 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	SCML4	Q8N228	414 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	ARFGAP1	Q8N6T3	406 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	HJURP	Q8NCD3	748 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	APPL2	Q8NEU8	664 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	C16orf52	Q8NHV5	167 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	MPLKIP	Q8TAP9	179 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	INPP5D	Q92835	1189 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	IGSF8	Q969P0	613 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	MOAP1	Q96BY2	351 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	COQ8B	Q96D53	544 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	CCDC34	Q96HJ3	373 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	NLRP4	Q96MN2	994 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	OR2A14	Q96R47	310 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	GAD1	Q99259	594 aa		5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	SIRT3	Q9NTG7	399 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	CWC15	Q9P013	229 aa	Known RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	MAGED1	Q9Y5V3	778 aa	Predicted RBP	5.51	□□□□□ -1.53
PRKDC-208	ENST00000536710	PASK	Q96RG2	1323 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CGB1	A6NKQ9	187 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CDRT15L2	A8MXV6	281 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	MS4A18	H0YCH9	400 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	SH2B2	O14492	632 aa	Predicted RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	VCY	O14598	125 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	LDB2	O43679	373 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	JRK	O75564	520 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	EPN2	O95208	641 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	TUBB	P07437	444 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CYC1	P08574	325 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	NR2F1	P10589	423 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	ANXA7	P20073	488 aa	Known RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PON1	P27169	355 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	ZBED6	P86452	979 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PRTG	Q2VWP7	1150 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	LRIF1	Q5T3J3	769 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PXDC1	Q5TGL8	231 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PQLC2	Q6ZP29	291 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PRPF39	Q86UA1	669 aa	Known RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	RNF168	Q8IYW5	571 aa	Predicted RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	MMP21	Q8N119	569 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CCDC191	Q8NCU4	936 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	C7orf57	Q8NEG2	295 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	AGBL3	Q8NEM8	1001 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	OR8K5	Q8NH50	307 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	TMEM163	Q8TC26	289 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PIGO	Q8TEQ8	1089 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	SLC25A28	Q96A46	364 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CRAMP1	Q96RY5	1269 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	APOL6	Q9BWW8	343 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	TXLNGY	Q9BZA5	131 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	HRH4	Q9H3N8	390 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	HINT3	Q9NQE9	182 aa	Known RBP	5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	GIMAP4	Q9NUV9	329 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	C11orf21	Q9P2W6	132 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	PAM16	Q9Y3D7	125 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	CMAHP	Q9Y471	501 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	STON1	Q9Y6Q2	735 aa		5.5	□□□□□ -1.53
PRKDC-208	ENST00000536710	IGLV5-39	A0A0G2JS06	123 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TSPY2	A6NKD2	308 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PPFIA2	O75334	1257 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	ADRB2	P07550	413 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TSPY3	P0CV98	308 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TSPY8	P0CW00	308 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	G6PD	P11413	515 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	SELL	P14151	372 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PRF1	P14222	555 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	HOXA13	P31271	388 aa	Predicted RBP	5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PRCP	P42785	496 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	INHBE	P58166	350 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TSPY1	Q01534	308 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PPAT	Q06203	517 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	MYBPC2	Q14324	1141 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	RABEP1	Q15276	862 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	RASA2	Q15283	850 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	ZNF284	Q2VY69	593 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PCGF3	Q3KNV8	242 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	SIGIRR	Q6IA17	410 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	CFAP77	Q6ZQR2	320 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	SHF	Q7M4L6	423 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	ZNF367	Q7RTV3	350 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	DNAJC10	Q8IXB1	793 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TMTC2	Q8N394	836 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	KCTD6	Q8NC69	237 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	PRPF31	Q8WWY3	499 aa	Known RBP	5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	TRIB2	Q92519	343 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	SLC22A18	Q96BI1	424 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	SEPT5	Q99719	369 aa	Predicted RBP	5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	AP1M1	Q9BXS5	423 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	KLHL4	Q9C0H6	718 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	MKKS	Q9NPJ1	570 aa	Predicted RBP	5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	ARHGEF38	Q9NXL2	777 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	OR6C3	Q9NZP0	311 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	FAM169A	Q9Y6X4	670 aa		5.49	□□□□□ -1.53
PRKDC-208	ENST00000536710	LRRC72	A6NJI9	287 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms