RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 POU6F1Q14863 301 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ARHGAP36Q6ZRI8 547 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 TRPV1Q8NER1 839 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ACVR1CQ8NER5 493 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 MRPL57Q9BQC6 102 aaKnown RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 PNPLA3Q9NST1 481 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 TREX1Q9NSU2 369 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 GID8Q9NWU2 228 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 BCAP29Q9UHQ4 241 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 CORINQ9Y5Q5 1042 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 FAM95CA0A1B0GW59 222 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ZNF701M0R085 212 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ZBTB14O43829 449 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 PIGNO95427 931 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ESRRBO95718 433 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 CYBAP13498 195 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 THPOP40225 353 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 SLC12A2P55011 1212 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 MLLT6P55198 1093 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 DNAJB13P59910 316 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 MS4A2Q01362 244 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 HERC3Q15034 1050 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 ARL13AQ5H913 290 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 LYSMD3Q7Z3D4 306 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 FIBCD1Q8N539 461 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 KCTD4Q8WVF5 259 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 CCDC126Q96EE4 140 aa17.99■□□□□ 0.47
RAB40C-203ENST00000535977 MRPL46Q9H2W6 279 aaKnown RBP17.99■□□□□ 0.47
RAB40C-203ENST00000535977 KRBA1A5PL33 1030 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 E9PAM4 449 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 H3BMQ9 156 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 TK2O00142 265 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 PLOD2O00469 737 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 AIM2O14862 343 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 GIPC1O14908 333 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 RNASEH2AO75792 299 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 SBK3P0C264 359 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 RENBPP51606 427 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 NAGLUP54802 743 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 YWHAHQ04917 246 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 KCNJ8Q15842 424 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 PHKG1Q16816 387 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 FGD3Q5JSP0 725 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 ESRP1Q6NXG1 681 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 RASAL3Q86YV0 1011 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 SLC41A1Q8IVJ1 513 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 CENPLQ8N0S6 344 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 MAPK15Q8TD08 544 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 COG8Q96MW5 612 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 SLC25A51Q9H1U9 297 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 COQ10BQ9H8M1 238 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 CLK4Q9HAZ1 481 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 SACM1LQ9NTJ5 587 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 CDYLQ9Y232 598 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 TIMM22Q9Y584 194 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 PATJQ8NI35 1801 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 HEATR9A2RTY3 570 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 PHGDHO43175 533 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 SAT1P21673 171 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 NUDT2P50583 147 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 ZNF157P51786 506 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 PIWIL4Q7Z3Z4 852 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 MON1AQ86VX9 555 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 DCP1BQ8IZD4 617 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 HM13Q8TCT9 377 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 TANKQ92844 425 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 ZNF597Q96LX8 424 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 KLHL32Q96NJ5 620 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 CDRT15Q96T59 188 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 ADAM2Q99965 735 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 VPS28Q9UK41 221 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 CNOT11Q9UKZ1 510 aaKnown RBP17.98■□□□□ 0.47
RAB40C-203ENST00000535977 ERGIC3Q9Y282 383 aa17.98■□□□□ 0.47
RAB40C-203ENST00000535977 TRPC5OSA6NMA1 111 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 FAM47E-STBD1D6RA91 191 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MGEA5O60502 916 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 HLA-DQB2P05538 268 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MPSTP25325 297 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 ARPC4P59998 168 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 DMPKQ09013 629 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MOGQ16653 247 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 PAN2Q504Q3 1202 aaKnown RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 GALNT7Q86SF2 657 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SCD5Q86SK9 330 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MYO1HQ8N1T3 1032 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SLC15A4Q8N697 577 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 RNF148Q8N7C7 305 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 TAMM41Q96BW9 452 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 LENG8Q96PV6 779 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 OR52B2Q96RD2 323 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 TMEM209Q96SK2 561 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SEMA6AQ9H2E6 1030 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SFMBT1Q9UHJ3 866 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 IPO11Q9UI26 975 aaKnown RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 VPS51Q9UID3 782 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 FBXO5Q9UKT4 447 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 TLR6Q9Y2C9 796 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 PTPRDP23468 1912 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 PIK3R1P27986 724 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms