RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 PDCD6IPQ8WUM4 868 aaKnown RBP8.87□□□□□ -0.99
CHD4-204ENST00000535810 BTN2A2Q8WVV5 523 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 PDLIM2Q96JY6 352 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 TBATAQ96M53 351 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 TSGA13Q96PP4 275 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 MCCC1Q96RQ3 725 aaPredicted RBP8.87□□□□□ -0.99
CHD4-204ENST00000535810 SEMA3CQ99985 751 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 SLC13A1Q9BZW2 595 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 POLR1EQ9GZS1 481 aaKnown RBP8.87□□□□□ -0.99
CHD4-204ENST00000535810 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 DTLQ9NZJ0 730 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 SPASTQ9UBP0 616 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 INTUQ9ULD6 942 aa8.87□□□□□ -0.99
CHD4-204ENST00000535810 ASXL3Q9C0F0 2248 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 TRABD2BA6NFA1 517 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 NPIPB15A6NHN6 443 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 LMO7DNF2Z398 122 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 FZD6O60353 706 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 HEXIM1O94992 359 aaKnown RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 HLA-DQB2P05538 268 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 GP1BAP07359 652 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 CELA2BP08218 269 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 CCNB1P14635 433 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 JUPP14923 745 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 TSHRP16473 764 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 MX2P20592 715 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 CCNCP24863 283 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 HTR1BP28222 390 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 VIPR1P32241 457 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 SLC1A1P43005 524 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 HK3P52790 923 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 INSM1Q01101 510 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 DSC2Q02487 901 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 PPARDQ03181 441 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 ACOX1Q15067 660 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 ALG11Q2TAA5 492 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 COL28A1Q2UY09 1125 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 ARMC12Q5T9G4 340 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 LRRC38Q5VT99 294 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 KCTD16Q68DU8 428 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 SLC9A4Q6AI14 798 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 TIGD7Q6NT04 549 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 ESRP1Q6NXG1 681 aaKnown RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 PELI3Q8N2H9 469 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 MDM1Q8TC05 714 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 PIH1D2Q8WWB5 315 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 FUBP1Q96AE4 644 aaKnown RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 HDAC11Q96DB2 347 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 PDXPQ96GD0 296 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 COQ10AQ96MF6 247 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 BBC3Q96PG8 261 aaPredicted RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 RNF157Q96PX1 679 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 APOOQ9BUR5 198 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 CLPBQ9H078 707 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
CHD4-204ENST00000535810 USP29Q9HBJ7 922 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
CHD4-204ENST00000535810 PHTF1Q9UMS5 762 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 HYOU1Q9Y4L1 999 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 TTLL3Q9Y4R7 772 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 RAI2Q9Y5P3 530 aa8.86□□□□□ -0.99
CHD4-204ENST00000535810 TMEM202A6NGA9 273 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 KCNK1O00180 336 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 TPP1O14773 563 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 APOL1O14791 398 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 YY2O15391 372 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 RASGRP1O95267 797 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 LCA5LO95447 670 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 KRT1P04264 644 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
CHD4-204ENST00000535810 PDHA1P08559 390 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 ALPIP09923 528 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 CYP2A6P11509 494 aaPredicted RBP8.85□□□□□ -0.99
CHD4-204ENST00000535810 COMTP21964 271 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 NFKBIAP25963 317 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 TRIM23P36406 574 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 ETV3P41162 512 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 BLKP51451 505 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 ZNF75DP51815 510 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 HADHBP55084 474 aaKnown RBP8.85□□□□□ -0.99
CHD4-204ENST00000535810 KIAA1024LP59773 190 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 SRP54P61011 504 aaKnown RBP8.85□□□□□ -0.99
CHD4-204ENST00000535810 E2F1Q01094 437 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 PPIDQ08752 370 aaKnown RBP8.85□□□□□ -0.99
CHD4-204ENST00000535810 ITKQ08881 620 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 C19orf57Q0VDD7 668 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 ZBTB17Q13105 803 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 TARDBPQ13148 414 aaKnown RBP eCLIP8.85□□□□□ -0.99
CHD4-204ENST00000535810 C1orf61Q13536 156 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 PTPRRQ15256 657 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 CDKN3Q16667 212 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 MSS51Q4VC12 460 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 FAXCQ5TGI0 409 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 ENPP7Q6UWV6 458 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 USP45Q70EL2 814 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 HSD11B1LQ7Z5J1 315 aa8.85□□□□□ -0.99
CHD4-204ENST00000535810 TSPAN33Q86UF1 283 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms