RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 WDR26Q9H7D7 661 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 APOBEC3BQ9UH17 382 aaKnown RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 RSPH14Q9UHP6 348 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 TRHDEQ9UKU6 1024 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 C1orf232A0A0U1RR37 186 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 FZD6O60353 706 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 PMPCBO75439 489 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 PIAS2O75928 621 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 TRIM16O95361 564 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 MMP2P08253 660 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 FTH1P19P0C7X4 201 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 CTSEP14091 401 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
CAPN1-227ENST00000533909 DGKAP23743 735 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 PPARDQ03181 441 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 GALNT3Q14435 633 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 NFATC4Q14934 902 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 RPS6KA1Q15418 735 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 ITPRIPL1Q6GPH6 555 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 RAET1GQ6H3X3 334 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 CRTC1Q6UUV9 634 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 ENPP7Q6UWV6 458 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 HSD11B1LQ7Z5J1 315 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 TSPAN33Q86UF1 283 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 HID1Q8IV36 788 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 LMX1AQ8TE12 382 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 DTD2Q96FN9 168 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 COQ10AQ96MF6 247 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 WDR92Q96MX6 357 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 PHPT1Q9NRX4 125 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-227ENST00000533909 GPR27Q9NS67 375 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 EVA1BQ9NVM1 165 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 UBP1Q9NZI7 540 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 SPASTQ9UBP0 616 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 KLQ9UEF7 1012 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 ANGPTL2Q9UKU9 493 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
CAPN1-227ENST00000533909 ANKRD66B4E2M5 251 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 F5H423 210 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-227ENST00000533909 ENC1O14682 589 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 KCNN4O15554 427 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 SLC4A1P02730 911 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 RBP3P10745 1247 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 TSHRP16473 764 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 NFKB1P19838 968 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 LHCGRP22888 699 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 RBL1P28749 1068 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 CCZ1BP86790 482 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-227ENST00000533909 DAB2P98082 770 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 CDK18Q07002 472 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 WASHC5Q12768 1159 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 PTPRRQ15256 657 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 SLC14A2Q15849 920 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 QPCTQ16769 361 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
CAPN1-227ENST00000533909 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 PNCKQ6P2M8 343 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 Q6ZVL8 140 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 GLRX5Q86SX6 157 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 PHACTR4Q8IZ21 702 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 ZNF567Q8N184 647 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 ZNF548Q8NEK5 533 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-227ENST00000533909 SPATA22Q8NHS9 363 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 LRRC45Q96CN5 670 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 AP2M1Q96CW1 435 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 FAM118BQ9BPY3 351 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 DUSP23Q9BVJ7 150 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 FSD1LQ9BXM9 530 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 UCKL1Q9NWZ5 548 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 FAM153AQ9UHL3 310 aa13.38□□□□□ -0.27
CAPN1-227ENST00000533909 DDX3YO15523 660 aaKnown RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 AQP9O43315 295 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 RASGRP1O95267 797 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 CLDN7O95471 211 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 NDST3O95803 873 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 MT-CYBP00156 380 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PRLP01236 227 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PYGLP06737 847 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 ATXN1LP0C7T5 689 aaKnown RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 GPR1P46091 355 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 KIAA1024LP59773 190 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 EIF2B5Q13144 721 aaKnown RBP13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PRRT3Q5FWE3 981 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 TPRG1LQ5T0D9 272 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 FAM182AQ5T1J6 154 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 SLC25A45Q8N413 288 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 PNPLA1Q8N8W4 532 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
CAPN1-227ENST00000533909 OR4C6Q8NH72 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms