RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SMAD1Q15797 465 aaKnown RBP9.85□□□□□ -0.83
NUP98-220ENST00000533346 CRTC1Q6UUV9 634 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 NPNTQ6UXI9 565 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 PTAR1Q7Z6K3 402 aaPredicted RBP9.85□□□□□ -0.83
NUP98-220ENST00000533346 KIAA1328Q86T90 577 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 LRRC8AQ8IWT6 810 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 KLHDC8BQ8IXV7 354 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 SPC24Q8NBT2 197 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 DTX3LQ8TDB6 740 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 HES6Q96HZ4 224 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 CNDP2Q96KP4 475 aaKnown RBP9.85□□□□□ -0.83
NUP98-220ENST00000533346 FCRL5Q96RD9 977 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 TEX101Q9BY14 249 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 OSBPL8Q9BZF1 889 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 TSGA10Q9BZW7 698 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 NCKIPSDQ9NZQ3 722 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 NFKBIL1Q9UBC1 381 aaPredicted RBP9.85□□□□□ -0.83
NUP98-220ENST00000533346 SPASTQ9UBP0 616 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 FTSJ1Q9UET6 329 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 KLF15Q9UIH9 416 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 TRHDEQ9UKU6 1024 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 AMFRQ9UKV5 643 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 PNMA8BQ9ULN7 279 aaPredicted RBP9.85□□□□□ -0.83
NUP98-220ENST00000533346 COQ6Q9Y2Z9 468 aa9.85□□□□□ -0.83
NUP98-220ENST00000533346 SCN8AQ9UQD0 1980 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 LOC285095A0A1B0GVY8 99 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 TRIM38O00635 465 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 DDX3YO15523 660 aaKnown RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 AQP9O43315 295 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 KRT86O43790 486 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 NEBLO76041 1014 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 TJP3O95049 919 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 PRKCGP05129 697 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 GP1BAP07359 652 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ATXN1LP0C7T5 689 aaKnown RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 ALPPL2P10696 532 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 CKMT1AP12532 417 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 JUNDP17535 347 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 CD68P34810 354 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 CETN2P41208 172 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ACADVLP49748 655 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 HK3P52790 923 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 STC1P52823 247 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 IL9RQ01113 521 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 PPARDQ03181 441 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ITKQ08881 620 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 KLF1Q13351 362 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 ARHGEF7Q14155 803 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 QPCTQ16769 361 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 HSD11B1LQ7Z5J1 315 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 GALNT15Q8N3T1 639 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 FSTL5Q8N475 847 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 EID2Q8N6I1 236 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 PLA2G15Q8NCC3 412 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 HTR3CQ8WXA8 447 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ALG3Q92685 438 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 FUBP1Q96AE4 644 aaKnown RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 NUS1Q96E22 293 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 WDR92Q96MX6 357 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 QKIQ96PU8 341 aaKnown RBP eCLIP9.84□□□□□ -0.83
NUP98-220ENST00000533346 RBM15Q96T37 977 aaKnown RBP eCLIP9.84□□□□□ -0.83
NUP98-220ENST00000533346 C19orf43Q9BQ61 176 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 MLPHQ9BV36 600 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 SCNM1Q9BWG6 230 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 BOCQ9BWV1 1114 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 ADGRE3Q9BY15 652 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 CDH19Q9H159 772 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 GLOD4Q9HC38 313 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 MAGEE1Q9HCI5 957 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 UCKL1Q9NWZ5 548 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 DNAJC28Q9NX36 388 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 SAE1Q9UBE0 346 aaPredicted RBP9.84□□□□□ -0.83
NUP98-220ENST00000533346 CHKBQ9Y259 395 aa9.84□□□□□ -0.83
NUP98-220ENST00000533346 COL27A1Q8IZC6 1860 aaPredicted RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 LMO7DNF2Z398 122 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 K7ESM1 405 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 CACNB4O00305 520 aaPredicted RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 SIGLEC6O43699 453 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 RFPL3O75679 317 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 RASGRP1O95267 797 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 CAPNS1P04632 268 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 PYGMP11217 842 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 MYCLP1P12525 358 aaPredicted RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 TNNT1P13805 278 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 CD86P42081 329 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 DUSP3P51452 185 aaPredicted RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 NAP1L1P55209 391 aaKnown RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 DYNLT1P63172 113 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 E2F1Q01094 437 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 CDK18Q07002 472 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 FOXC1Q12948 553 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 COL9A2Q14055 689 aaPredicted RBP9.83□□□□□ -0.84
NUP98-220ENST00000533346 ACOX1Q15067 660 aa9.83□□□□□ -0.84
NUP98-220ENST00000533346 KAZNQ674X7 775 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms