RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 MCCC1Q96RQ3 725 aaPredicted RBP17.25■□□□□ 0.35
PHRF1-204ENST00000532550 LGMNQ99538 433 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 BOCQ9BWV1 1114 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 WDR26Q9H7D7 661 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 LUC7LQ9NQ29 371 aaKnown RBP17.25■□□□□ 0.35
PHRF1-204ENST00000532550 GULP1Q9UBP9 304 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 MOSPD1Q9UJG1 213 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 DGKBQ9Y6T7 804 aa17.25■□□□□ 0.35
PHRF1-204ENST00000532550 EME2A4GXA9 379 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-204ENST00000532550 TMEM202A6NGA9 273 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 NPIPB15A6NHN6 443 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-204ENST00000532550 C3orf70A6NLC5 250 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-204ENST00000532550 TNFRSF10CO14798 259 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 FZD6O60353 706 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 CYLC1P35663 651 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-204ENST00000532550 ETV3P41162 512 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 AP1B1Q10567 949 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 PDK1Q15118 436 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 SLC9A4Q6AI14 798 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 HSD11B1LQ7Z5J1 315 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 RFX6Q8HWS3 928 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 PLD5Q8N7P1 536 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 NXPE2Q96DL1 559 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 DTD2Q96FN9 168 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 NRSN2Q9GZP1 204 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 PHPT1Q9NRX4 125 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-204ENST00000532550 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 HYOU1Q9Y4L1 999 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 PCDHA13Q9Y5I0 950 aa17.24■□□□□ 0.35
PHRF1-204ENST00000532550 RP1P56715 2156 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 A0A0J9YYE9 177 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GOLGA6CA6NDK9 693 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GOLGA6BA6NDN3 693 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 KCNK1O00180 336 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 LCA5LO95447 670 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 TRBC1P01850 177 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 CELA2BP08218 269 aaPredicted RBP17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GOLGA6DP0CG33 693 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 LHCGRP22888 699 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 ZNF75DP51815 510 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 PPIDQ08752 370 aaKnown RBP17.23■□□□□ 0.35
PHRF1-204ENST00000532550 PTPRRQ15256 657 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 TCEA2Q15560 299 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GUSBP11Q6P575 273 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 Q6ZVL8 140 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 ARRDC2Q8TBH0 407 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 OR1E3Q8WZA6 343 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 NAT6Q93015 286 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 MRFAP1L1Q96HT8 127 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 LGR4Q9BXB1 951 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 PCDH9Q9HC56 1237 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 CYP4F12Q9HCS2 524 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 MRPL40Q9NQ50 206 aaKnown RBP17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GOLGA6AQ9NYA3 693 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 PADI4Q9UM07 663 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 GPR34Q9UPC5 381 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 RAXQ9Y2V3 346 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 ALG6Q9Y672 507 aa17.23■□□□□ 0.35
PHRF1-204ENST00000532550 FREM2Q5SZK8 3169 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 PPP1R12AO14974 1030 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 ZNF30P17039 623 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 HADHBP55084 474 aaKnown RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 RPL26P61254 145 aaKnown RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 DYNLT1P63172 113 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 PTSQ03393 145 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 NIPAL4Q0D2K0 466 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 CDCP2Q5VXM1 449 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 LRRC66Q68CR7 880 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 CRTC1Q6UUV9 634 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 BZW1Q7L1Q6 419 aaKnown RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 TAF8Q7Z7C8 310 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 PELI3Q8N2H9 469 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 PDXPQ96GD0 296 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 RBM15Q96T37 977 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 TDRD1Q9BXT4 1180 aaKnown RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 TEX101Q9BY14 249 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 BRD8Q9H0E9 1235 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 FGF22Q9HCT0 170 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 SIRPGQ9P1W8 387 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 DNPEPQ9ULA0 475 aa17.22■□□□□ 0.35
PHRF1-204ENST00000532550 RPL26L1Q9UNX3 145 aaKnown RBP17.22■□□□□ 0.35
PHRF1-204ENST00000532550 PKD1L2Q7Z442 2459 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 TGM2P21980 687 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 CD86P42081 329 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 GPR1P46091 355 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 IFI35P80217 286 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-204ENST00000532550 TFDP2Q14188 446 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 IHHQ14623 411 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 RTP5Q14D33 572 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 MFSD7Q6UXD7 560 aa17.21■□□□□ 0.35
PHRF1-204ENST00000532550 NPNTQ6UXI9 565 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms