RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR2AP1Q8NGE2 309 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 PATE1Q8WXA2 126 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 DPYSL5Q9BPU6 564 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 SPON2Q9BUD6 331 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 SPATS2LQ9NUQ6 558 aaKnown RBP8.25□□□□□ -1.09
CD44-232ENST00000531118 RRN3Q9NYV6 651 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 MPP6Q9NZW5 540 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 ZNF212Q9UDV6 495 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 COQ4Q9Y3A0 265 aa8.25□□□□□ -1.09
CD44-232ENST00000531118 ILVBLA1L0T0 632 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 PRSS38A1L453 326 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 SLC35F4A4IF30 521 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 I6L893 689 aaPredicted RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 RNF225M0QZC1 329 aaPredicted RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 CACNB4O00305 520 aaPredicted RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 CUTAO60888 179 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 LRCH4O75427 683 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 DAB1O75553 588 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ECEL1O95672 775 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 EPB41P11171 864 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 CCNB1P14635 433 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 RPL13P26373 211 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 OR1E1P30953 314 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 SLC20A2Q08357 652 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ELP6Q0PNE2 266 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 POU4F2Q12837 409 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 CHAF1BQ13112 559 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 NME3Q13232 169 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 PDCLQ13371 301 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ADAM9Q13443 819 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 BIRC2Q13490 618 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 SQSTM1Q13501 440 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 SWI5Q1ZZU3 235 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ZXDCQ2QGD7 858 aaPredicted RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 ZCWPW2Q504Y3 356 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ATXN7L2Q5T6C5 722 aaPredicted RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ANKRD40Q6AI12 368 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 TMEM71Q6P5X7 295 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ZNF783Q6ZMS7 281 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 NRROSQ86YC3 692 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 PLA2G15Q8NCC3 412 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 TSEN2Q8NCE0 465 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 ARHGEF2Q92974 986 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 KAT5Q92993 513 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 FUBP1Q96AE4 644 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 ISG20Q96AZ6 181 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 RNF31Q96EP0 1072 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 MED15Q96RN5 788 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 SLC25A23Q9BV35 468 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 TWSG1Q9GZX9 223 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 THAP9Q9H5L6 903 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ANLNQ9NQW6 1124 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 ARHGEF38Q9NXL2 777 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 FAM13BQ9NYF5 915 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 TAAR2Q9P1P5 351 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 DYRK1BQ9Y463 629 aa8.24□□□□□ -1.09
CD44-232ENST00000531118 PCDHGA9Q9Y5G4 932 aaKnown RBP8.24□□□□□ -1.09
CD44-232ENST00000531118 IGLV3-10A0A075B6K4 115 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 DRGXA6NNA5 263 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 TNFRSF10CO14798 259 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 INPP4BO15327 924 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 DIAPH2O60879 1101 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 HSF2BPO75031 334 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 RHOBTB3O94955 611 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 FGF1P05230 155 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 RHOQP17081 205 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 KELP23276 732 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 MMP12P39900 470 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 NOP2P46087 812 aaKnown RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 SNRPD1P62314 119 aaKnown RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 GPLD1P80108 840 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 GNA12Q03113 381 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 POLD3Q15054 466 aaPredicted RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 MEA1Q16626 185 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 EFHC1Q5JVL4 640 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 SNAP47Q5SQN1 464 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 PAPD7Q5XG87 772 aaKnown RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 JMJD6Q6NYC1 403 aaPredicted RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 GDPD4Q6W3E5 623 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 TMEM110Q86TL2 294 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 TTC7BQ86TV6 843 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 CEP57L1Q8IYX8 460 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 NAGSQ8N159 534 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 LURAP1Q96LR2 239 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 GDAP1L1Q96MZ0 367 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 GSDMCQ9BYG8 508 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 ULBP3Q9BZM4 244 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 TKTL2Q9H0I9 626 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 SUDS3Q9H7L9 328 aaPredicted RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 CARS2Q9HA77 564 aaKnown RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 MLXIPLQ9NP71 852 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 SLAMF7Q9NQ25 335 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 PIGVQ9NUD9 493 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 ASNSD1Q9NWL6 643 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms