RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SRP54P61011 504 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 COPS2P61201 443 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 DAB2P98082 770 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 DPTQ07507 201 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 ELOCQ15369 112 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 SLC14A2Q15849 920 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TEX44Q53QW1 395 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 PRRT3Q5FWE3 981 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 NPNTQ6UXI9 565 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TECPR1Q7Z6L1 1165 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TMEM139Q8IV31 216 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 PLA2G15Q8NCC3 412 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 KIAA1524Q8TCG1 905 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 FUBP1Q96AE4 644 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 NUS1Q96E22 293 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 DTD2Q96FN9 168 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 LYSMD1Q96S90 227 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 CAAP1Q9H8G2 361 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 EFR3BQ9Y2G0 817 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 TTLL3Q9Y4R7 772 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 OR1A2Q9Y585 309 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
TRAPPC4-209ENST00000528230 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CAPN8A6NHC0 703 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 MTSS1O43312 755 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 GCATO75600 419 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ANXA6P08133 673 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 MMP2P08253 660 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ALPIP09923 528 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CTSEP14091 401 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CTPS1P17812 591 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CTNNA1P35221 906 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 DYNLT1P63172 113 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 SKOR1P84550 965 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 PTSQ03393 145 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZBTB17Q13105 803 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 PRKD1Q15139 912 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ALG11Q2TAA5 492 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 CRTC1Q6UUV9 634 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 Q6ZVL8 140 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 HID1Q8IV36 788 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 NRSN1Q8IZ57 195 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 OR56A4Q8NGH8 313 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 TFB1MQ8WVM0 346 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 P3H4Q92791 437 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 GLMNQ92990 594 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 TSACCQ96A04 125 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 IMP4Q96G21 291 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 LRRC61Q9BV99 259 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 BOCQ9BWV1 1114 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 TEX101Q9BY14 249 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 ADGRE3Q9BY15 652 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 LACRTQ9GZZ8 138 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 WDR26Q9H7D7 661 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 DUSP10Q9Y6W6 482 aa12.11□□□□□ -0.47
TRAPPC4-209ENST00000528230 LY6G6EA0A0G2JKS1 128 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 GOLGA6L6A8MZA4 724 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 HACD1B0YJ81 288 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 YY2O15391 372 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CAPNS1P04632 268 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 PYGLP06737 847 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 MYCLP1P12525 358 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 JUPP14923 745 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CTNNA2P26232 953 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 ETV3P41162 512 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CD86P42081 329 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 MARCKSL1P49006 195 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 RPIAP49247 311 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 XRCC4Q13426 336 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 C1orf61Q13536 156 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CAMK2BQ13554 666 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 DEFB133Q30KQ1 61 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 KAZNQ674X7 775 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 LRRC66Q68CR7 880 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 BBS12Q6ZW61 710 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZNF765Q7L2R6 523 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 KIAA1328Q86T90 577 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
TRAPPC4-209ENST00000528230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms