RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
CCDC90B-205ENST00000525916 TMEM59LQ9UK28 342 aa12.53□□□□□ -0.4
CCDC90B-205ENST00000525916 DNAJC12Q9UKB3 198 aa12.53□□□□□ -0.4
CCDC90B-205ENST00000525916 TP53TG5Q9Y2B4 290 aa12.53□□□□□ -0.4
CCDC90B-205ENST00000525916 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 PRSS38A1L453 326 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 TNFRSF10CO14798 259 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 EPHB6O15197 1021 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 LRIG2O94898 1065 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ECEL1O95672 775 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 FGF1P05230 155 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 KRT7P08729 469 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 THRAP10827 490 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 CCNB1P14635 433 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 CSTF2P33240 577 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 KLRB1Q12918 225 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 RALGDSQ12967 914 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 TRA2AQ13595 282 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 C15orf59Q2T9L4 293 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ATP1A1-AS1Q5TC04 95 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ANKS6Q68DC2 871 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 NRROSQ86YC3 692 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 NRSN1Q8IZ57 195 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 PELI3Q8N2H9 469 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 EMC1Q8N766 993 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 APOBEC4Q8WW27 367 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 TBC1D31Q96DN5 1066 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 STK33Q9BYT3 514 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 NOL6Q9H6R4 1146 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 METTL5Q9NRN9 209 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 PILRAQ9UKJ1 303 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ATP8A1Q9Y2Q0 1164 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
CCDC90B-205ENST00000525916 ITPR2Q14571 2701 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 ENO4A6NNW6 628 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 K7EM74 188 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 AGFG2O95081 481 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 KELP23276 732 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 AK4P27144 223 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 ADRA1BP35368 520 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 JAM2P57087 298 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CLPPQ16740 277 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 DCAF12Q5T6F0 453 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 PHLDB2Q86SQ0 1253 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 NEK11Q8NG66 645 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CASKIN2Q8WXE0 1202 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 STARD8Q92502 1023 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CTRCQ99895 268 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 ASPSCR1Q9BZE9 553 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 SUV39H2Q9H5I1 410 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 CARS2Q9HA77 564 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 TAAR2Q9P1P5 351 aa12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 RP1L1Q8IWN7 2480 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-205ENST00000525916 HIVEP3Q5T1R4 2406 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 IGHV1OR21-1A0A087WYE8 117 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 ZW10O43264 779 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 GM2AP17900 193 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 TRIM23P36406 574 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 GPR3P46089 330 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 RAB15P59190 212 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 POLR2FP61218 127 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 BIRC2Q13490 618 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 SEPT6Q14141 434 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 CYTH1Q15438 398 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 TSR1Q2NL82 804 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 TAF3Q5VWG9 929 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 C16orf46Q6P387 395 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 LIPIQ6XZB0 460 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 CAMK1DQ8IU85 385 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 NAGSQ8N159 534 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 CCDC185Q8N715 623 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 BMPERQ8N8U9 685 aa12.5□□□□□ -0.41
CCDC90B-205ENST00000525916 HCAR2Q8TDS4 363 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms