RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ZNF140P52738 457 aaPredicted RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 TAS2R38P59533 333 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 PTSQ03393 145 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 ANO7Q6IWH7 933 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 ERAP2Q6P179 960 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 DPPA4Q7L190 304 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 FAM124AQ86V42 546 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 CCNJLQ8IV13 435 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 PGBD3Q8N328 593 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 PTCD2Q8WV60 388 aaKnown RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 TTC25Q96NG3 672 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 NAT9Q9BTE0 207 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 TRABDQ9H4I3 376 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 SUDS3Q9H7L9 328 aaPredicted RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.27
CLK4-210ENST00000522136 FAM169AQ9Y6X4 670 aa13.4□□□□□ -0.27
CLK4-210ENST00000522136 SCN8AQ9UQD0 1980 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 SHBGP04278 402 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 C1SP09871 688 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
CLK4-210ENST00000522136 ARNTP27540 789 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 RPS9P46781 194 aaKnown RBP13.39□□□□□ -0.27
CLK4-210ENST00000522136 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLK4-210ENST00000522136 OR2W6PQ8NHA6 318 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 FBF1Q8TES7 1133 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 STYXQ8WUJ0 223 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 TBATAQ96M53 351 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 IL17CQ9P0M4 197 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 BCCIPQ9P287 314 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLK4-210ENST00000522136 EBF1Q9UH73 591 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 FADS3Q9Y5Q0 445 aa13.39□□□□□ -0.27
CLK4-210ENST00000522136 TCRBV9S1A1TA0A576 114 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 OR51F1A6NGY5 319 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 NEMP1O14524 444 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 STX7O15400 261 aaKnown RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 MMP20O60882 483 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 VAPBO95292 243 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 ACADMP11310 421 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 HMGCLP35914 325 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 PXNP49023 591 aaPredicted RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 CASP8Q14790 479 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLK4-210ENST00000522136 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 TSTD1Q8NFU3 115 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 NLE1Q9NVX2 485 aaPredicted RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 DLGAP2Q9P1A6 1054 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 SLC17A6Q9P2U8 582 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 COQ6Q9Y2Z9 468 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 PAPSS2O95340 614 aaPredicted RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 ARCN1P48444 511 aaKnown RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 LIG3P49916 1009 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 STC1P52823 247 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 ZBTB16Q05516 673 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 PNPLA1Q8N8W4 532 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 OR14C36Q8NHC7 312 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 CDKN2AIPNLQ96HQ2 116 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 PPANQ9NQ55 473 aaKnown RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
CLK4-210ENST00000522136 MOCS1Q9NZB8 636 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 FKBPLQ9UIM3 349 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 RABGEF1Q9UJ41 708 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 PKP3Q9Y446 797 aa13.38□□□□□ -0.27
CLK4-210ENST00000522136 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 CCDC162PA2VCL2 907 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 CXorf49A8MYA2 514 aaPredicted RBP13.37□□□□□ -0.27
CLK4-210ENST00000522136 M0R296 226 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
CLK4-210ENST00000522136 C1QAP02745 245 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 C7P10643 843 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 BPIP17213 487 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 TPMTP51580 245 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 ACVR1Q04771 509 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 ELP6Q0PNE2 266 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 LONRF1Q17RB8 773 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
CLK4-210ENST00000522136 Q6ZVL8 140 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 GPR26Q8NDV2 337 aa13.37□□□□□ -0.27
CLK4-210ENST00000522136 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms