RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TBC1D3Q8IZP1 549 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 AADATQ8N5Z0 425 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 GIPC3Q8TF64 312 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 PHPT1Q9NRX4 125 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 SLC38A8A6NNN8 435 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 H3BNX3 289 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 MLYCDO95822 493 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 CCNA2P20248 432 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 MIER2Q8N344 545 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 SELENOMQ8WWX9 145 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 EZH1Q92800 747 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 ART4Q93070 314 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 CPQQ9Y646 472 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 SQORQ9Y6N5 450 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 PFKFB4Q16877 469 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TIGD5Q53EQ6 642 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 STK32CQ86UX6 486 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 BHLHE22Q8NFJ8 381 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 RNFT2Q96EX2 444 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 PLEKHG4BQ96PX9 1271 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 CERS4Q9HA82 394 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 PIRTP0C851 137 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.19
USP42-207ENST00000521713 FCHO2Q0JRZ9 810 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CHST9Q7L1S5 443 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 ACTRT2Q8TDY3 377 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 ALG3Q92685 438 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 HDAC10Q969S8 669 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 DUS2Q9NX74 493 aaKnown RBP16.21■□□□□ 0.19
USP42-207ENST00000521713 ANAPC2Q9UJX6 822 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 KCNU1A8MYU2 1149 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 NRP1O14786 923 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 SERPINA6P08185 405 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CCNCP24863 283 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 JAG1P78504 1218 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 SP2Q02086 613 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 GNA12Q03113 381 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 DUPD1Q68J44 220 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CYP20A1Q6UW02 462 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 IL27RAQ6UWB1 636 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 DET1Q7L5Y6 550 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 BNIPLQ7Z465 357 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 SIAH1Q8IUQ4 282 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CYP4Z2PQ8N1L4 340 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CHID1Q9BWS9 393 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
USP42-207ENST00000521713 SNX8Q9Y5X2 465 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 PIGNO95427 931 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 RAB10P61026 200 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 GAD2Q05329 585 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 SPIRE1Q08AE8 756 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 GALNT3Q14435 633 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 OTUD3Q5T2D3 398 aaPredicted RBP16.21■□□□□ 0.19
USP42-207ENST00000521713 CEP68Q76N32 757 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 DAW1Q8N136 415 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 PHC3Q8NDX5 983 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 KBTBD8Q8NFY9 601 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 DPEP3Q9H4B8 488 aa16.21■□□□□ 0.19
USP42-207ENST00000521713 NOL4O94818 638 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 PGM3O95394 542 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 NDST3O95803 873 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 HSMCR30P0CW71 290 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 TFEBP19484 476 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 S100A3P33764 101 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 ALDH6A1Q02252 535 aaKnown RBP16.21■□□□□ 0.18
USP42-207ENST00000521713 PTP4A2Q12974 167 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 GPM6BQ13491 265 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 ANGPT1Q15389 498 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 PRSS55Q6UWB4 352 aaPredicted RBP16.21■□□□□ 0.18
USP42-207ENST00000521713 SYT12Q8IV01 421 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 SLC41A1Q8IVJ1 513 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 ACSS3Q9H6R3 686 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 ZFYVE1Q9HBF4 777 aa16.21■□□□□ 0.18
USP42-207ENST00000521713 URADA6NGE7 173 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 M0R2N6 131 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 MATN2O00339 956 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 S100A9P06702 114 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 SLC10A3P09131 477 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 HOXB6P17509 224 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 RPL14P50914 215 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 JAM2P57087 298 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 RAB30Q15771 203 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 HGSNATQ68CP4 663 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 KLHL17Q6TDP4 642 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 PTGR2Q8N8N7 351 aaPredicted RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 PTCD3Q96EY7 689 aaKnown RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 FEM1CQ96JP0 617 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ZFP14Q9HCL3 533 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 COL1A1P02452 1464 aaPredicted RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 BIRC5O15392 142 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ZNF682O95780 498 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 MYBL2P10244 700 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
USP42-207ENST00000521713 MC4RP32245 332 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 GNA13Q14344 377 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 KLHL35Q6PF15 583 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 TAC4Q86UU9 113 aa16.2■□□□□ 0.18
USP42-207ENST00000521713 ADHFE1Q8IWW8 467 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms