RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SESN1Q9Y6P5 492 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 CAPN7Q9Y6W3 813 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 ADGRF5Q8IZF2 1346 aa4.2□□□□□ -1.74
SQLE-204ENST00000520493 A0A096LPK6 155 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 TRBV5-7A0A0A0MS05 114 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 TARSL2A2RTX5 802 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 PRR23D1E9PI22 279 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 LIASO43766 372 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 HNRNPCL1O60812 293 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 TBCAO75347 108 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 NDUFS3O75489 264 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 MT-CYBP00156 380 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 PRR23D2P0DMB1 279 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 SCG2P13521 617 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 EEF1DP29692 281 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 OAS2P29728 719 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 ARRB2P32121 409 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 PBX3P40426 434 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 GARSP41250 739 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 RFX2P48378 723 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 PIP4K2AP48426 406 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 CDH8P55286 799 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ROR2Q01974 943 aaKnown RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 EGR4Q05215 589 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 SLC18A2Q05940 514 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 LRMPQ12912 555 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ASIC2Q16515 512 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ME3Q16798 604 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 TMEM266Q2M3C6 531 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ZNF585BQ52M93 769 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 Q5PR19 223 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 WASHC2DQ5SRD0 308 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 GLDNQ6ZMI3 551 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 MOB3CQ70IA8 216 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 CHST9Q7L1S5 443 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 CAMK1DQ8IU85 385 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 C7orf57Q8NEG2 295 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 MCPH1Q8NEM0 835 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 OIT3Q8WWZ8 545 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 KAT2AQ92830 837 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 MMABQ96EY8 250 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 TMEM68Q96MH6 324 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 GLIS2Q9BZE0 524 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 FTOQ9C0B1 505 aaKnown RBP eCLIP4.19□□□□□ -1.74
SQLE-204ENST00000520493 CXorf56Q9H5V9 222 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ERVMER34-1Q9H9K5 563 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 GIMAP4Q9NUV9 329 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ABI3Q9P2A4 366 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 MARCH4Q9P2E8 410 aaPredicted RBP4.19□□□□□ -1.74
SQLE-204ENST00000520493 WNT16Q9UBV4 365 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 MYO6Q9UM54 1294 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 SLC4A4Q9Y6R1 1079 aa4.19□□□□□ -1.74
SQLE-204ENST00000520493 ERVV-2B6SEH9 535 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SEC14L5O43304 696 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 HCRTR2O43614 444 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SEC31AO94979 1220 aaKnown RBP4.18□□□□□ -1.74
SQLE-204ENST00000520493 CYP1A2P05177 515 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 QDPRP09417 244 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 TMEM11P17152 192 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 CD72P21854 359 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 KLRC2P26717 231 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 DPP6P42658 865 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 RASSF2P50749 326 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 EFNA5P52803 228 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 HDAC4P56524 1084 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 PLIN5Q00G26 463 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 PRPF4BQ13523 1007 aaKnown RBP4.18□□□□□ -1.74
SQLE-204ENST00000520493 PKP1Q13835 747 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 IRF3Q14653 427 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 ADIPOQQ15848 244 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 KYNUQ16719 465 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 ODF3L2Q3SX64 289 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SYTL3Q4VX76 610 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 TCP11X2Q5H9J9 407 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SLC10A5Q5PT55 438 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 GARNL3Q5VVW2 1013 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 TSSK4Q6SA08 328 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 GALNTL5Q7Z4T8 443 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SERPINA11Q86U17 422 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 RNF168Q8IYW5 571 aaPredicted RBP4.18□□□□□ -1.74
SQLE-204ENST00000520493 SLC25A41Q8N5S1 370 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 DPP10Q8N608 796 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 ZBTB8BQ8NAP8 495 aaPredicted RBP4.18□□□□□ -1.74
SQLE-204ENST00000520493 KCTD6Q8NC69 237 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 AFAP1L1Q8TED9 768 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 INPP5DQ92835 1189 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SNAPC3Q92966 411 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 MIB2Q96AX9 1013 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 OTULINQ96BN8 352 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 ZNF333Q96JL9 665 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 C1orf74Q96LT6 269 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 HEMGNQ9BXL5 484 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SLCO5A1Q9H2Y9 848 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 PDZD7Q9H5P4 517 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 MAP6D1Q9H9H5 199 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 ZNF304Q9HCX3 659 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 PDE7BQ9NP56 450 aa4.18□□□□□ -1.74
SQLE-204ENST00000520493 SLC35C2Q9NQQ7 365 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms