RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 UCNP55089 124 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 UBASH3AP57075 661 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 MAXP61244 160 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 ZBED6P86452 979 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 IHHQ14623 411 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 RALGPS1Q5JS13 557 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 CERCAMQ5T4B2 595 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 BROXQ5VW32 411 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 FOXR1Q6PIV2 292 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 HSD11B1LQ7Z5J1 315 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 LUZP1Q86V48 1076 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 ARL14Q8N4G2 192 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 TEX26Q8N6G2 289 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 PAF1Q8N7H5 531 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 SNRNP27Q8WVK2 155 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 PIH1D2Q8WWB5 315 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 SCRN2Q96FV2 425 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 GFM1Q96RP9 751 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 MCCC1Q96RQ3 725 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 NUP85Q9BW27 656 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 TEX101Q9BY14 249 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 FOXP3Q9BZS1 431 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 WDR26Q9H7D7 661 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 SYNDIG1Q9H7V2 258 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 CAPN11Q9UMQ6 739 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 ATMQ13315 3056 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 SYCE3A1L190 88 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 PRSS38A1L453 326 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 D6RAR5 112 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 TMX2-CTNND1H3BSU7 103 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 PLD2O14939 933 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 PGLSO95336 258 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 CPP00450 1065 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ITGA2BP08514 1039 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 PDHA1P08559 390 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 CD48P09326 243 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 MYCLP1P12525 358 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ETV3P41162 512 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 MMP13P45452 471 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 CDH6P55285 790 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ZFP36L1Q07352 338 aaKnown RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 C19orf57Q0VDD7 668 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ATP13A4Q4VNC1 1196 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ARHGAP40Q5TG30 622 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ALKBH5Q6P6C2 394 aaKnown RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 Q6ZVL8 140 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 RAB11FIP2Q7L804 512 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 TECPR1Q7Z6L1 1165 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 TSPAN33Q86UF1 283 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 C17orf82Q86X59 251 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 NRROSQ86YC3 692 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 LRRC49Q8IUZ0 686 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 CCNJLQ8IV13 435 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 FBXO39Q8N4B4 442 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ATPAF2Q8N5M1 289 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 NUS1Q96E22 293 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 DTD2Q96FN9 168 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 SPATS2LQ9NUQ6 558 aaKnown RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 KCTD5Q9NXV2 234 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 RCOR3Q9P2K3 495 aaPredicted RBP12.44□□□□□ -0.42
CSMD1-205ENST00000519623 LRIT1Q9P2V4 623 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 NENFQ9UMX5 172 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 RNF215Q9Y6U7 377 aa12.44□□□□□ -0.42
CSMD1-205ENST00000519623 A0A0U1RQS6 177 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 MYO1FO00160 1098 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 PSMD11O00231 422 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 B4GAT1O43505 415 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 FZD6O60353 706 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 FGF1P05230 155 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 CYP2A6P11509 494 aaPredicted RBP12.43□□□□□ -0.42
CSMD1-205ENST00000519623 CCNB1P14635 433 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 TEAD1P28347 426 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 CCKBRP32239 447 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 SERPINB6P35237 376 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 UGT1A5P35504 534 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 INHBCP55103 352 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 B4GALNT1Q00973 533 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 DPTQ07507 201 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 VAC14Q08AM6 782 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 CLN3Q13286 438 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
CSMD1-205ENST00000519623 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 C14orf28Q4W4Y0 310 aa12.43□□□□□ -0.42
CSMD1-205ENST00000519623 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms