RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RBM23Q86U06 439 aaKnown RBP6.18□□□□□ -1.42
PTPN12-213ENST00000519553 WASF1Q92558 559 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 FIZ1Q96SL8 496 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 ITPAQ9BY32 194 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 NOX4Q9NPH5 578 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 GPR108Q9NPR9 543 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 HINT3Q9NQE9 182 aaKnown RBP6.18□□□□□ -1.42
PTPN12-213ENST00000519553 OCIAD1Q9NX40 245 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 RCOR1Q9UKL0 485 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 ERVK-11Q9UQG0 969 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 FAM237AA0A1B0GTK4 181 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 hDV102S1A0JD36 115 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 SLC28A2O43868 658 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 IGHV4-30-4P0DP06 118 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 FCGR1AP12314 374 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 IL7RP16871 459 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 CCKARP32238 428 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPN12-213ENST00000519553 F2RL1P55085 397 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 DSCR9P59020 149 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 XKR9Q5GH70 373 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 PQLC2Q6ZP29 291 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 CCDC13Q8IYE1 715 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 PGBD5Q8N414 524 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 SPATA6LQ8N4H0 392 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 SMARCE1Q969G3 411 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 TMEM47Q9BQJ4 181 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 PPP1R3EQ9H7J1 279 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 MMP25Q9NPA2 562 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 CNGB3Q9NQW8 809 aa6.17□□□□□ -1.42
PTPN12-213ENST00000519553 FAM237BA0A1B0GVD1 139 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 PI4KAP2A4QPH2 592 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 GTPBP1O00178 669 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 PLRG1O43660 514 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 SCGB1D1O95968 90 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 T-ENOLP0DO92 83 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 KRT10P13645 584 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 MAPK4P31152 587 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 BRWD1-AS2P59051 145 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 SEC61A1P61619 476 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 DDR1Q08345 913 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 KIF5AQ12840 1032 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 GRSF1Q12849 480 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 MED22Q15528 200 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 AMZ1Q400G9 498 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 SLC45A4Q5BKX6 768 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 TTI2Q6NXR4 508 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 NCEH1Q6PIU2 408 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 MEPCEQ7L2J0 689 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 NGEFQ8N5V2 710 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 FRMD1Q8N878 549 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 ZNF114Q8NC26 417 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 MED30Q96HR3 178 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 THOC3Q96J01 351 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
PTPN12-213ENST00000519553 C17orf75Q9HAS0 396 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 CD93Q9NPY3 652 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 SELENONQ9NZV5 590 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 DLGAP2Q9P1A6 1054 aa6.16□□□□□ -1.42
PTPN12-213ENST00000519553 LIPT2A6NK58 231 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 SOCS6O14544 535 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE7O76087 117 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 NKX2-2O95096 273 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 PPP1R3DO95685 299 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 MLYCDO95822 493 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE12FP0CL80 117 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE12GP0CL81 117 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE12IP0CL82 117 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 DDX5P17844 614 aaKnown RBP6.15□□□□□ -1.42
PTPN12-213ENST00000519553 RAD23BP54727 409 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 SETQ01105 290 aaPredicted RBP6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE1Q13065 139 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GAGE4Q13068 117 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 KRT24Q2M2I5 525 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 CDONQ4KMG0 1287 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 METTL2BQ6P1Q9 378 aaKnown RBP6.15□□□□□ -1.42
PTPN12-213ENST00000519553 TAOK1Q7L7X3 1001 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 GSTA5Q7RTV2 222 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 ARHGAP12Q8IWW6 846 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 CREB3L4Q8TEY5 395 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 RND1Q92730 232 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 SCMH1Q96GD3 660 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 METTL2AQ96IZ6 378 aaKnown RBP6.15□□□□□ -1.42
PTPN12-213ENST00000519553 KRT84Q9NSB2 600 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 DIAPH3Q9NSV4 1193 aa6.15□□□□□ -1.42
PTPN12-213ENST00000519553 CNOT8Q9UFF9 292 aaKnown RBP6.15□□□□□ -1.42
PTPN12-213ENST00000519553 ITIH6Q6UXX5 1313 aa6.15□□□□□ -1.43
PTPN12-213ENST00000519553 VCYO14598 125 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 IPO7O95373 1038 aaKnown RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 DDX58O95786 925 aaKnown RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 EIF2S1P05198 315 aaKnown RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 ZNF182P17025 639 aaPredicted RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 STX2P32856 288 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 TUBA1BP68363 451 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 MYBPHQ13203 477 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 KEAP1Q14145 624 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 ZNF585BQ52M93 769 aa6.14□□□□□ -1.43
PTPN12-213ENST00000519553 CRELD2Q6UXH1 353 aaPredicted RBP6.14□□□□□ -1.43
PTPN12-213ENST00000519553 CREB3L2Q70SY1 520 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms