RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 LGR4Q9BXB1 951 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 ATP13A3Q9H7F0 1226 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 KCTD5Q9NXV2 234 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 UBA2Q9UBT2 640 aaPredicted RBP11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 DNAJC12Q9UKB3 198 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 NEU3Q9UQ49 428 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.53
TMEM55A-202ENST00000518359 CRYBG3Q68DQ2 2970 aa11.71□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM72CH0Y354 149 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 MPSTP25325 297 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 EPHB2P29323 1055 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 GNPDA1P46926 289 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 MC2RQ01718 297 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 ACOX1Q15067 660 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM72AQ5TYM5 149 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM72DQ6L9T8 149 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 LIPIQ6XZB0 460 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 ASB18Q6ZVZ8 466 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 DPPA4Q7L190 304 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 STRADAQ7RTN6 431 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM72BQ86X60 149 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 NRROSQ86YC3 692 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 CAMK1DQ8IU85 385 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 EMC1Q8N766 993 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 GALNT11Q8NCW6 608 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 OR10G6Q8NH81 332 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 FBXO8Q9NRD0 319 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 CUEDC1Q9NWM3 386 aaPredicted RBP11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 TMEM184BQ9Y519 407 aaPredicted RBP11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 LRBAP50851 2863 aa11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
TMEM55A-202ENST00000518359 CELSR2Q9HCU4 2923 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PRRC2CQ9Y520 2896 aaKnown RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 RASA4BC9J798 803 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PPM1DO15297 605 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 RASA4O43374 803 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 STK17BO94768 372 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PRKCGP05129 697 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 CYP11B1P15538 503 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 BMP6P22004 513 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 AK4P27144 223 aaPredicted RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 UQCRFS1P47985 274 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 RALGDSQ12967 914 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 CYTH1Q15438 398 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 C15orf59Q2T9L4 293 aaPredicted RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 AFMIDQ63HM1 303 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 CAPRIN2Q6IMN6 1127 aaKnown RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 ZSWIM9Q86XI8 627 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 NAGSQ8N159 534 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 ESX1Q8N693 406 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PATE1Q8WXA2 126 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 NTAN1Q96AB6 310 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 NUS1Q96E22 293 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 CTRCQ99895 268 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 KLC2Q9H0B6 622 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 NOL6Q9H6R4 1146 aaKnown RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 CATSPERBQ9H7T0 1116 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 DONSONQ9NYP3 566 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 TMEM9Q9P0T7 183 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
TMEM55A-202ENST00000518359 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 FAM170AA1A519 330 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 TTLL8A6PVC2 850 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 POLR1CO15160 346 aaPredicted RBP11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 RFPL1O75677 317 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 CEACAM5P06731 702 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 NR1D1P20393 614 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 GNLYP22749 145 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 NFKBIAP25963 317 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 ACTR1BP42025 376 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 STAT5AP42229 794 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 PTPN9P43378 593 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 FASLGP48023 281 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 CSNK1DP48730 415 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 ACTR1AP61163 376 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 CTBSQ01459 385 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 BCL2L1Q07817 233 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 MAP7Q14244 749 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 CCDC14Q49A88 953 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 RAB6CQ53S08 254 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 SNAP47Q5SQN1 464 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 TAF3Q5VWG9 929 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 TIPARPQ7Z3E1 657 aaKnown RBP11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 SRLQ86TD4 932 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 UMODL1-AS1Q8N2C9 162 aa11.68□□□□□ -0.54
TMEM55A-202ENST00000518359 CCDC185Q8N715 623 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms