RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 CCDC3Q9BQI4 270 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 BOCQ9BWV1 1114 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 MAK16Q9BXY0 300 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CARS2Q9HA77 564 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 MRPL40Q9NQ50 206 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 PHPT1Q9NRX4 125 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 SEPT10Q9P0V9 454 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 CD84Q9UIB8 345 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 HEY1Q9Y5J3 304 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 ZFHX4Q86UP3 3567 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 DMXL2Q8TDJ6 3036 aa10.59□□□□□ -0.71
SPIDR-205ENST00000518060 TDRD6O60522 2096 aaKnown RBP10.59□□□□□ -0.71
SPIDR-205ENST00000518060 ARID1BQ8NFD5 2236 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 A0A0U1RQS6 177 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 EME2A4GXA9 379 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 KCNK1O00180 336 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 APOL1O14791 398 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 SPOPO43791 374 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 HLA-DQB2P05538 268 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 CCNB1P14635 433 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 LHCGRP22888 699 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 GNPDA1P46926 289 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 ARSEP51690 589 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 BIRC2Q13490 618 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 RTP5Q14D33 572 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 ASTE1Q2TB18 679 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 CDCP2Q5VXM1 449 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 LRRC66Q68CR7 880 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 RFX6Q8HWS3 928 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 RHOT2Q8IXI1 618 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 CCDC13Q8IYE1 715 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 Q8N9G6 341 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 FAM46DQ8NEK8 389 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 TPCN2Q8NHX9 752 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 FAM71BQ8TC56 605 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 RAPGEF5Q92565 580 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 DTD2Q96FN9 168 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 NAF1Q96HR8 494 aaKnown RBP10.58□□□□□ -0.72
SPIDR-205ENST00000518060 LGR4Q9BXB1 951 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 TRIM5Q9C035 493 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 DPEP2Q9H4A9 486 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 CHKBQ9Y259 395 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 HYOU1Q9Y4L1 999 aa10.58□□□□□ -0.72
SPIDR-205ENST00000518060 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 PRSS38A1L453 326 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 AGRPO00253 132 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 TLX3O43711 291 aaPredicted RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 JCHAINP01591 159 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 SLC4A1P02730 911 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 RPLP0P05388 317 aaKnown RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 PDHA1P08559 390 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 GM2AP17900 193 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 KDELR1P24390 212 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 CCNCP24863 283 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 RBMS1P29558 406 aaKnown RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 NOP2P46087 812 aaKnown RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 GPR1P46091 355 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 CDK3Q00526 305 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 AP1B1Q10567 949 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 ILF3Q12906 894 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 ISXQ2M1V0 245 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 TBC1D25Q3MII6 688 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 LVRNQ6Q4G3 990 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 Q6ZVL8 140 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 PELI3Q8N2H9 469 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 TEX26Q8N6G2 289 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 MAML1Q92585 1016 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 FGF11Q92914 225 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 FAF2Q96CS3 445 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 AP2M1Q96CW1 435 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 SCRN2Q96FV2 425 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 RNF157Q96PX1 679 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 SMIM14Q96QK8 99 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 RBM15Q96T37 977 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 LGMNQ99538 433 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 TDRD1Q9BXT4 1180 aaKnown RBP10.57□□□□□ -0.72
SPIDR-205ENST00000518060 CEP41Q9BYV8 373 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 TMEM168Q9H0V1 697 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 EPB41L5Q9HCM4 733 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 SATB2Q9UPW6 733 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 DGKBQ9Y6T7 804 aa10.57□□□□□ -0.72
SPIDR-205ENST00000518060 KNTC1P50748 2209 aa10.56□□□□□ -0.72
SPIDR-205ENST00000518060 A0A087WV48 116 aa10.56□□□□□ -0.72
SPIDR-205ENST00000518060 CAPN8A6NHC0 703 aa10.56□□□□□ -0.72
SPIDR-205ENST00000518060 PSMD11O00231 422 aa10.56□□□□□ -0.72
SPIDR-205ENST00000518060 TNFRSF10CO14798 259 aa10.56□□□□□ -0.72
SPIDR-205ENST00000518060 CASC3O15234 703 aaKnown RBP10.56□□□□□ -0.72
SPIDR-205ENST00000518060 INPP4BO15327 924 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms