RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GNL1P36915 607 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 RGRP47804 291 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 LEPRP48357 1165 aaKnown RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 NKX6-1P78426 367 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 CHAF1AQ13111 956 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 KCNAB1Q14722 419 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 TTC31Q49AM3 519 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 TMEM196Q5HYL7 178 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 MANEALQ5VSG8 457 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 ZNF836Q6ZNA1 936 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 SHFQ7M4L6 423 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 CHERPQ8IWX8 916 aaKnown RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 CCDC105Q8IYK2 499 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 RNF113BQ8IZP6 322 aaKnown RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 MPP5Q8N3R9 675 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 OR52I2Q8NH67 350 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 LRRC15Q8TF66 581 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 SLCO2A1Q92959 643 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 MRGPRX1Q96LB2 322 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 PPP1R9BQ96SB3 815 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 PIP5K1AQ99755 562 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 RTP3Q9BQQ7 232 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 TMX4Q9H1E5 349 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 SFXN1Q9H9B4 322 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 PCDH9Q9HC56 1237 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 PANK4Q9NVE7 773 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 FBXL17Q9UF56 701 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 LTBP4Q8N2S1 1624 aa-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 COL27A1Q8IZC6 1860 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-542P-201ENST00000516405 FLT1P17948 1338 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 LOC102723971A0A1B0GUV8 181 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 ASB14A6NK59 587 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 MPTX1A8MV57 137 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 ZNF861PO60384 105 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 CBR3O75828 277 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 BCL10O95999 233 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 NR3C1P04150 777 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 CD1EP15812 388 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 PTPN3P26045 913 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 PIGAP37287 484 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARFIP2P53365 341 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 HERV-K104P61576 105 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARID5AQ03989 594 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 FAM27E3Q08E93 113 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 RUNX3Q13761 415 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 NR1D2Q14995 579 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 E2F5Q15329 346 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 CCDC96Q2M329 555 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 VWA5B1Q5TIE3 1220 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 KRTAP19-3Q7Z4W3 81 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 TRABD2AQ86V40 505 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 HSCBQ8IWL3 235 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 MKXQ8IYA7 352 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 RNF182Q8N6D2 247 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 TMEM178AQ8NBL3 297 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 SRFBP1Q8NEF9 429 aaKnown RBP-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 OR56A3Q8NH54 315 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 EXD1Q8NHP7 514 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 FAM110DQ8TAY7 271 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 RND1Q92730 232 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 IL22RA2Q969J5 263 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 HDAC11Q96DB2 347 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 LINGO1Q96FE5 620 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 SLC45A3Q96JT2 553 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 KRT12Q99456 494 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 TARS2Q9BW92 718 aaKnown RBP-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 GORASP2Q9H8Y8 452 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 SMURF2Q9HAU4 748 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 MCM9Q9NXL9 1143 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 ACSL5Q9ULC5 683 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 JRKLQ9Y4A0 524 aa-0.81□□□□□ -2.54
RNU6-542P-201ENST00000516405 SHROOM3Q8TF72 1996 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 IGKV3D-11A0A0A0MRZ8 115 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 H3BUI4 141 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 BTN3A1O00481 513 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 WNT9BO14905 357 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 SLC16A6O15403 523 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 RNMTO43148 476 aaKnown RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 HARSP12081 509 aaKnown RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 PRKCHP24723 683 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 CORO1AP31146 461 aaKnown RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 CYP2J2P51589 502 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 MAP2K6P52564 334 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 PPIAP62937 165 aaKnown RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 KIAA0141Q14154 515 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARHGEF7Q14155 803 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 KCTD19Q17RG1 926 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 Q1RN00 199 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 HLA-BQ31612 363 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 MOGAT2Q3SYC2 334 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 GPATCH4Q5T3I0 446 aaKnown RBP-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARHGEF16Q5VV41 709 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 REG3GQ6UW15 175 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 KSR2Q6VAB6 950 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 RAD9BQ6WBX8 426 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 KRBA2Q6ZNG9 492 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 NECAB2Q7Z6G3 386 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 TMTC1Q8IUR5 882 aa-0.82□□□□□ -2.54
RNU6-542P-201ENST00000516405 HACE1Q8IYU2 909 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms