RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	TMEM268	Q5VZI3	342 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	SYNE3	Q6ZMZ3	975 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	CLEC17A	Q6ZS10	378 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	SERPINA11	Q86U17	422 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	WDR5B	Q86VZ2	330 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	TMPRSS12	Q86WS5	348 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	ZDHHC23	Q8IYP9	409 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	DEFB123	Q8N688	67 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	IGSF21	Q96ID5	467 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	LHPP	Q9H008	270 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	DDX31	Q9H8H2	851 aa	Known RBP	4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	SLC22A11	Q9NSA0	550 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	UPB1	Q9UBR1	384 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	OSGIN2	Q9Y236	505 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	RCE1	Q9Y256	329 aa		4.65	□□□□□ -1.67
RUFY3-215	ENST00000515479	ZNF609	O15014	1411 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	CENPF	P49454	3210 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	IGHV4-28	A0A0C4DH34	117 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	FSD2	A1L4K1	749 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	DDTL	A6NHG4	134 aa	Predicted RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	ERVV-1	B6SEH8	477 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	HNRNPR	O43390	633 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	EPB41L2	O43491	1005 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYL1	P05976	194 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	SNRNP70	P08621	437 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	MX1	P20591	662 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	SERPINA4	P29622	427 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	MMP14	P50281	582 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	PRMT2	P55345	433 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	WBP2NL	Q6ICG8	309 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	KIF6	Q6ZMV9	814 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	ZNF527	Q8NB42	609 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	C3orf49	Q96BT1	292 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	EID2B	Q96D98	161 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	TXNDC15	Q96J42	360 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	CLPB	Q9H078	707 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	USP44	Q9H0E7	712 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	KL	Q9UEF7	1012 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	HERC5	Q9UII4	1024 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	LRRFIP2	Q9Y608	721 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	PSME4	Q14997	1843 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	UTY	O14607	1347 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYH1	P12882	1939 aa		4.64	□□□□□ -1.67
RUFY3-215	ENST00000515479	KDM4E	B2RXH2	506 aa	Predicted RBP	4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	PSMD14	O00487	310 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	BUB3	O43684	328 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	REC8	O95072	547 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	UBTFL1	P0CB47	393 aa	Predicted RBP	4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	CYP4B1	P13584	511 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	AP2B1	P63010	937 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	BNC1	Q01954	994 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	MYBPC2	Q14324	1141 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	PARP10	Q53GL7	1025 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	BEND3	Q5T5X7	828 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	DGAT2L7P	Q6IED9	249 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	KLHL17	Q6TDP4	642 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	RINL	Q6ZS11	566 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	GALNT7	Q86SF2	657 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	TRIM74	Q86UV6	250 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	TRIM73	Q86UV7	250 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	NEXN-AS1	Q8NBZ9	246 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	AGBL3	Q8NEM8	1001 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	CD99L2	Q8TCZ2	262 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	DNAAF4	Q8WXU2	420 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	TMEM18	Q96B42	140 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	INPP4A	Q96PE3	977 aa	Predicted RBP	4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	SLC25A33	Q9BSK2	321 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	LRRCC1	Q9C099	1032 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	IL25	Q9H293	177 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	ARNT2	Q9HBZ2	717 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	NLRC4	Q9NPP4	1024 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	PRDM8	Q9NQV8	689 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	NDUFAF4	Q9P032	175 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	AGO1	Q9UL18	857 aa	Known RBP	4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	EXOC6B	Q9Y2D4	811 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	RAD50	Q92878	1312 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	RFX7	Q2KHR2	1363 aa		4.63	□□□□□ -1.67
RUFY3-215	ENST00000515479	IGLV5-52	A0A0A0MRZ9	124 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	CYP21A2	P08686	494 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	HOXD10	P28358	340 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	SKIV2L2	P42285	1042 aa	Known RBP	4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	DPP6	P42658	865 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	DLX5	P56178	289 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	POU5F1B	Q06416	359 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	PFKFB4	Q16877	469 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	LRRC24	Q50LG9	513 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	EFHC1	Q5JVL4	640 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	RETSAT	Q6NUM9	610 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	AADACL2	Q6P093	401 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	XRRA1	Q6P2D8	792 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	CASC1	Q6TDU7	716 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	BRSK2	Q8IWQ3	736 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	SCAI	Q8N9R8	606 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	TEX45	Q8NA69	505 aa		4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.62	□□□□□ -1.67
RUFY3-215	ENST00000515479	SCAMP5	Q8TAC9	235 aa		4.62	□□□□□ -1.67

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