RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 AURKAO14965 403 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 EIF3HO15372 352 aaKnown RBP eCLIP20.99■□□□□ 0.95
LSM6-207ENST00000515311 LDB2O43679 373 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 RNGTTO60942 597 aaKnown RBP20.99■□□□□ 0.95
LSM6-207ENST00000515311 CLDN7O95471 211 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 C6P13671 934 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 ECHS1P30084 290 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 CREB5Q02930 508 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 PTSQ03393 145 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 ERCC6LQ2NKX8 1250 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 PCID2Q5JVF3 399 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 CEP128Q6ZU80 1094 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 CENPUQ71F23 418 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 NLRP9Q7RTR0 991 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 C11orf74Q86VG3 221 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 HORMAD1Q86X24 394 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 PPHLN1Q8NEY8 458 aaKnown RBP20.99■□□□□ 0.95
LSM6-207ENST00000515311 PEX13Q92968 403 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 EID2BQ96D98 161 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 SIGLEC10Q96LC7 697 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 TSPYL1Q9H0U9 437 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 MRM3Q9HC36 420 aaKnown RBP20.99■□□□□ 0.95
LSM6-207ENST00000515311 SYBUQ9NX95 663 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 MBD1Q9UIS9 605 aaPredicted RBP20.99■□□□□ 0.95
LSM6-207ENST00000515311 RIMKLBQ9ULI2 386 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 TCAF1Q9Y4C2 921 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 PLXNA2O75051 1894 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 A0A1W2PQU0 124 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 RGSL1A5PLK6 1076 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 MMP20O60882 483 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 NDUFS2O75306 463 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 SP9P0CG40 484 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 LPOP22079 712 aaPredicted RBP20.98■□□□□ 0.95
LSM6-207ENST00000515311 CNR2P34972 360 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 CCR5P51681 352 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 ZNF140P52738 457 aaPredicted RBP20.98■□□□□ 0.95
LSM6-207ENST00000515311 CRADDP78560 199 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 MTM1Q13496 603 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 SEPT6Q14141 434 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 AGERQ15109 404 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 MSS51Q4VC12 460 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 DENND2CQ68D51 928 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 GPR161Q8N6U8 529 aaKnown RBP20.98■□□□□ 0.95
LSM6-207ENST00000515311 FRMD1Q8N878 549 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 CADM4Q8NFZ8 388 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 GAB3Q8WWW8 586 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 ASB12Q8WXK4 309 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 COQ10AQ96MF6 247 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 PWWP2AQ96N64 755 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 FMO2Q99518 471 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 NAT9Q9BTE0 207 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 LRFN3Q9BTN0 628 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 KIFC1Q9BW19 673 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 GPR174Q9BXC1 333 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 C1QTNF2Q9BXJ5 285 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 ZSCAN32Q9NX65 697 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 KCTD5Q9NXV2 234 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 IL17CQ9P0M4 197 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 SAMD15Q9P1V8 674 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.98■□□□□ 0.95
LSM6-207ENST00000515311 SOX13Q9UN79 622 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 ZFR2Q9UPR6 939 aaKnown RBP20.98■□□□□ 0.95
LSM6-207ENST00000515311 PKP3Q9Y446 797 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 ARL5AQ9Y689 179 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 V9GYY5 206 aaPredicted RBP20.98■□□□□ 0.95
LSM6-207ENST00000515311 CEP192Q8TEP8 1941 aa20.98■□□□□ 0.95
LSM6-207ENST00000515311 A0A0U1RQS6 177 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 PRR23AA6NEV1 266 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 IGLON5A6NGN9 336 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 FAM47DPA6NHR8 397 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 LATO43561 262 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 TM7SF2O76062 418 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 C1SP09871 688 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 MCM3P25205 808 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 PSMA3P25788 255 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 DHX9Q08211 1270 aaKnown RBP20.97■□□□□ 0.95
LSM6-207ENST00000515311 ZNF284Q2VY69 593 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 BBS9Q3SYG4 887 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 CCDC38Q502W7 563 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 SEL1L3Q68CR1 1132 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 KIAA0895LQ68EN5 471 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 WDR93Q6P2C0 686 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 CYP2U1Q7Z449 544 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 HSD11B1LQ7Z5J1 315 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 AGGF1Q8N302 714 aaeCLIP20.97■□□□□ 0.95
LSM6-207ENST00000515311 MPP5Q8N3R9 675 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 ZBTB44Q8NCP5 570 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.97■□□□□ 0.95
LSM6-207ENST00000515311 CDH19Q9H159 772 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 EPC1Q9H2F5 836 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 RAD18Q9NS91 495 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 PKD2L2Q9NZM6 624 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 NFKBIL1Q9UBC1 381 aaPredicted RBP20.97■□□□□ 0.95
LSM6-207ENST00000515311 NFU1Q9UMS0 254 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 INVSQ9Y283 1065 aa20.97■□□□□ 0.95
LSM6-207ENST00000515311 RPP40O75818 363 aaKnown RBP20.96■□□□□ 0.95
LSM6-207ENST00000515311 SLC4A1P02730 911 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 TUBBP07437 444 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 GM2AP17900 193 aa20.96■□□□□ 0.95
LSM6-207ENST00000515311 NUDT1P36639 197 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms