RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 NLRP8Q86W28 1048 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 AGGF1Q8N302 714 aaeCLIP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 PAF1Q8N7H5 531 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 OR2T34Q8NGX1 318 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 SGSM3Q96HU1 749 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 FMO2Q99518 471 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 EBNA1BP2Q99848 306 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 BTBD1Q9H0C5 482 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 ZFYVE1Q9HBF4 777 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 RAD18Q9NS91 495 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 TCAF1Q9Y4C2 921 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 TNRC6BQ9UPQ9 1833 aaKnown RBP11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 DOCK9Q9BZ29 2069 aa11.99□□□□□ -0.49
PDLIM5-220ENST00000514830 BPTFQ12830 3046 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 SPAG17Q6Q759 2223 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 C1orf232A0A0U1RR37 186 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 C2orf81A6NN90 581 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 H7C0S8 307 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 PLK4O00444 970 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 LATO43561 262 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 AVILO75366 819 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 TTC4O95801 387 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 TSHRP16473 764 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 TPH1P17752 444 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 LPOP22079 712 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 MGAT1P26572 445 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 CD6P30203 668 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 NBL1P41271 181 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 CCR5P51681 352 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 ZNF140P52738 457 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 SESN2P58004 480 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 DCDC1P59894 354 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 RPS21P63220 83 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 FAM193AP78312 1265 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 PTSQ03393 145 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 DHX9Q08211 1270 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 ARHGEF7Q14155 803 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 HLTFQ14527 1009 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 USP39Q53GS9 565 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 SPDYCQ5MJ68 293 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 LRRC66Q68CR7 880 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 SLC36A4Q6YBV0 504 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 ZNF765Q7L2R6 523 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 LYSMD3Q7Z3D4 306 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 GLT6D1Q7Z4J2 308 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 TECPR1Q7Z6L1 1165 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 LONP2Q86WA8 852 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 NRSN1Q8IZ57 195 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 PPHLN1Q8NEY8 458 aaKnown RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 OR14C36Q8NHC7 312 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 BLOC1S5Q8TDH9 187 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 GANCQ8TET4 914 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 STYXQ8WUJ0 223 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 EID2BQ96D98 161 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 ERLEC1Q96DZ1 483 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 COQ10AQ96MF6 247 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 PLEKHG4BQ96PX9 1271 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 TREX1Q9NSU2 369 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 NLE1Q9NVX2 485 aaPredicted RBP11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 SYBUQ9NX95 663 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 PLXNB3Q9ULL4 1909 aa11.98□□□□□ -0.49
PDLIM5-220ENST00000514830 AURKAO14965 403 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 USP1O94782 785 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 CLDN7O95471 211 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 SEMA4FO95754 770 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 GSTA2P09210 222 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 ELFN1P0C7U0 828 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 PIRTP0C851 137 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 GM2AP17900 193 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 PGAM1P18669 254 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 ACSL1P33121 698 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 CNR2P34972 360 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 HADHAP40939 763 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 LIG3P49916 1009 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 TERF1P54274 439 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 VSNL1P62760 191 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 DPTQ07507 201 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 POU6F1Q14863 301 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 SLMAPQ14BN4 828 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 SKIDA1Q1XH10 827 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 BBS9Q3SYG4 887 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 TSTD2Q5T7W7 516 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 STEAP4Q687X5 459 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 CYS1Q717R9 158 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 TSPAN33Q86UF1 283 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 HORMAD1Q86X24 394 aa11.97□□□□□ -0.49
PDLIM5-220ENST00000514830 CXorf40AQ8TE69 158 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms