RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KLHL29Q96CT2 875 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 MYO19Q96H55 970 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 TM6SF2Q9BZW4 377 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 ARHGEF3Q9NR81 526 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 TDP1Q9NUW8 608 aa14.96□□□□□ -0.01
VCAN-211ENST00000513984 C2orf16Q68DN1 1984 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 H7C0S8 307 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 HTRA2O43464 458 aaPredicted RBP14.95□□□□□ -0.02
VCAN-211ENST00000513984 POU2F2P09086 479 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 TCF3P15923 654 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 TARSP26639 723 aaKnown RBP14.95□□□□□ -0.02
VCAN-211ENST00000513984 SUOXP51687 545 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 RPL26P61254 145 aaKnown RBP14.95□□□□□ -0.02
VCAN-211ENST00000513984 USP4Q13107 963 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 PITRM1Q5JRX3 1037 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 ARMC12Q5T9G4 340 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
VCAN-211ENST00000513984 TCF12Q99081 682 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 DRC3Q9H069 523 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 LRMDAQ9H2I8 198 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 POPDC3Q9HBV1 291 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 MAGEE1Q9HCI5 957 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 POLR3BQ9NW08 1133 aaPredicted RBP14.95□□□□□ -0.02
VCAN-211ENST00000513984 DNAJC28Q9NX36 388 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 ZMYM5Q9UJ78 669 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 RPL26L1Q9UNX3 145 aaKnown RBP14.95□□□□□ -0.02
VCAN-211ENST00000513984 CRYL1Q9Y2S2 319 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 PCDHB9Q9Y5E1 797 aa14.95□□□□□ -0.02
VCAN-211ENST00000513984 FCHO1O14526 889 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TRAFD1O14545 582 aaPredicted RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 DLX3O60479 287 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 HNRNPCL1O60812 293 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 SOCS5O75159 536 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ZNF821O75541 412 aaPredicted RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 CBX6O95503 412 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 HSPA4LO95757 839 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 CCDC166P0CW27 439 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 MYOGP15173 224 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 NQO1P15559 274 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 HLA-FP30511 346 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ABL2P42684 1182 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TIAL1Q01085 375 aaKnown RBP eCLIP14.94□□□□□ -0.02
VCAN-211ENST00000513984 ASPHQ12797 758 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 KRT72Q14CN4 511 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ACAP2Q15057 778 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ZNF77Q15935 545 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 KLC3Q6P597 504 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ALYREFQ86V81 257 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 SPATA6LQ8N4H0 392 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 EFHBQ8N7U6 833 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PIH1D2Q8WWB5 315 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 INPP5DQ92835 1189 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 AARSD1Q9BTE6 412 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 TUBB6Q9BUF5 446 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 NMUR2Q9GZQ4 415 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PNPOQ9NVS9 261 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ZDHHC7Q9NXF8 308 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 EVLQ9UI08 416 aaPredicted RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 LNPEPQ9UIQ6 1025 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ZNF711Q9Y462 761 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 CHD7Q9P2D1 2997 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ZNF195O14628 629 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 STX7O15400 261 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 PRAMEF12O95522 483 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 IGSF6O95976 241 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PMLP29590 882 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 EPHB1P54762 984 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 DNAJB13P59910 316 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 KCNJ2P63252 427 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PFKPQ01813 784 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TUBB3Q13509 450 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 RCN2Q14257 317 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 FBXW10Q5XX13 1052 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PDE12Q6L8Q7 609 aaKnown RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 TMEM207Q6UWW9 146 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 MAVSQ7Z434 540 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TTC7BQ86TV6 843 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TMEM25Q86YD3 366 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 ANKRD49Q8WVL7 239 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 LPGAT1Q92604 370 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 PRR11Q96HE9 360 aaPredicted RBP14.94□□□□□ -0.02
VCAN-211ENST00000513984 C19orf43Q9BQ61 176 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 EBF4Q9BQW3 602 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 FKBPLQ9UIM3 349 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 HAO1Q9UJM8 370 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 TRIM33Q9UPN9 1127 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 HS3ST2Q9Y278 367 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 VPS9D1Q9Y2B5 631 aa14.94□□□□□ -0.02
VCAN-211ENST00000513984 CCDC22O60826 627 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 SLC4A1P02730 911 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 RBP1P09455 135 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 PRSS56P0CW18 603 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 SRCP12931 536 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 ATP5F1P24539 256 aaPredicted RBP14.93□□□□□ -0.02
VCAN-211ENST00000513984 HMGCLP35914 325 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 RASSF2P50749 326 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 NTHL1P78549 312 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 BCL2L1Q07817 233 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 FUT11Q495W5 492 aa14.93□□□□□ -0.02
VCAN-211ENST00000513984 DGKKQ5KSL6 1271 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms