RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FCF1Q9Y324 198 aaKnown RBP8.38□□□□□ -1.07
RNF4-220ENST00000513578 ZNF711Q9Y462 761 aa8.38□□□□□ -1.07
RNF4-220ENST00000513578 VCANP13611 3396 aa8.38□□□□□ -1.07
RNF4-220ENST00000513578 PLXNB3Q9ULL4 1909 aa8.38□□□□□ -1.07
RNF4-220ENST00000513578 MYO7AQ13402 2215 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 DENND4AQ7Z401 1863 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 A0A0J9YYE9 177 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 MYO1CO00159 1063 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SCAMP3O14828 347 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 AURKAO14965 403 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 STX7O15400 261 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 HOXC11O43248 304 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 HNRNPCL1O60812 293 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 PRAMEF12O95522 483 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 POP4O95707 220 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 TRBC1P01850 177 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ASLP04424 464 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 RBP1P09455 135 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 LTA4HP09960 611 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 MYL2P10916 166 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 PABPC1P11940 636 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 MYOGP15173 224 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 CEBPBP17676 345 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SERPINA4P29622 427 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 PLA2G5P39877 138 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ABCG1P45844 678 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SCTRP47872 440 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SLC1A6P48664 564 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 TTPAP49638 278 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ABCE1P61221 599 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 ACAP2Q15057 778 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SHHQ15465 462 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 CDKN3Q16667 212 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 FAM83EQ2M2I3 478 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 FUT11Q495W5 492 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ZNF789Q5FWF6 425 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 AARS2Q5JTZ9 985 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 DGKKQ5KSL6 1271 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 RBM20Q5T481 1227 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 AGAP9Q5VTM2 703 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 LIPMQ5VYY2 423 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 CES4AQ5XG92 561 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ASTLQ6HA08 431 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 C22orf39Q6P5X5 142 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 TPGS1Q6ZTW0 290 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SPRED2Q7Z698 418 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 TBC1D1Q86TI0 1168 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 ARID3BQ8IVW6 561 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 AHI1Q8N157 1196 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 FSTL5Q8N475 847 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 OR4K2Q8NGD2 314 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 RFWD2Q8NHY2 731 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 PPP1R14CQ8TAE6 165 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 PIWIL2Q8TC59 973 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 GRIN3AQ8TCU5 1115 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 HCAR2Q8TDS4 363 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 WFIKKN2Q8TEU8 576 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 KCTD4Q8WVF5 259 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 LPGAT1Q92604 370 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 ZNF641Q96N77 438 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 LRRC37BQ96QE4 947 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 OLFM1Q99784 485 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 AARSD1Q9BTE6 412 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 TUBB6Q9BUF5 446 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 BBS2Q9BXC9 721 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SMG9Q9H0W8 520 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 MRPL46Q9H2W6 279 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 SFXN1Q9H9B4 322 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 TRPV4Q9HBA0 871 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 SYTL2Q9HCH5 934 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 NPHS2Q9NP85 383 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 IGSF5Q9NSI5 407 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 EVLQ9UI08 416 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 SORCS3Q9UPU3 1222 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 YBX2Q9Y2T7 364 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 MRPS23Q9Y3D9 190 aaKnown RBP8.37□□□□□ -1.07
RNF4-220ENST00000513578 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
RNF4-220ENST00000513578 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 TSPAN11A1L157 253 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 CFAP73A6NFT4 308 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 CAPN8A6NHC0 703 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 GRXCR1A8MXD5 290 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 K7ERQ8 282 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 NPHS1O60500 1241 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 UBOX5O94941 541 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SRPRAP08240 638 aaKnown RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 TYRP14679 529 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ATP5F1P24539 256 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 SLC8A1P32418 973 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 MAGEA9P43362 315 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 EPHB1P54762 984 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 NTHL1P78549 312 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms