RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
KDM3B-208ENST00000512928 APOOQ9BUR5 198 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 GPR27Q9NS67 375 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
KDM3B-208ENST00000512928 DTLQ9NZJ0 730 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 GULP1Q9UBP9 304 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 CD84Q9UIB8 345 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 CHKBQ9Y259 395 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.52□□□□□ -1.37
KDM3B-208ENST00000512928 PCDHA13Q9Y5I0 950 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 FAM208BQ5VWN6 2430 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 PCNX2A6NKB5 2137 aa6.52□□□□□ -1.37
KDM3B-208ENST00000512928 DOCK9Q9BZ29 2069 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PKD1L2Q7Z442 2459 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 ANKRD36A6QL64 1941 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TRPM6Q9BX84 2022 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 A0A0A6YYK5 440 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 MACROD2A1Z1Q3 448 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CFAP69A5D8W1 941 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 FAM221BA6H8Z2 402 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 RCCD1A6NED2 376 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TRABD2BA6NFA1 517 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 F5H423 210 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TOR1BO14657 336 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 YY2O15391 372 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PJA2O43164 708 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 HTRA2O43464 458 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PSTPIP1O43586 416 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 HEXIM1O94992 359 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 NDUFA10O95299 355 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PDHA1P08559 390 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CKMT1AP12532 417 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 ZFXP17010 805 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 LHCGRP22888 699 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 ACP1P24666 158 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PEX5P50542 639 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 HK3P52790 923 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 E2F1Q01094 437 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CYP4F3Q08477 520 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SLC10A2Q12908 348 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 ZBTB17Q13105 803 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 GALNT3Q14435 633 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PDK1Q15118 436 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 ELOCQ15369 112 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PCSK7Q16549 785 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 LRRC66Q68CR7 880 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PNCKQ6P2M8 343 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 GUSBP11Q6P575 273 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 MFSD7Q6UXD7 560 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 EFL1Q7Z2Z2 1120 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 HSD11B1LQ7Z5J1 315 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TAF8Q7Z7C8 310 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 KIAA1328Q86T90 577 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 GKN2Q86XP6 184 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 LRRC8AQ8IWT6 810 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 FSTL5Q8N475 847 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TEX26Q8N6G2 289 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PLD5Q8N7P1 536 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PDCD7Q8N8D1 485 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SPC24Q8NBT2 197 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 OR56A4Q8NGH8 313 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 MAML1Q92585 1016 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 FUBP1Q96AE4 644 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 FAF2Q96CS3 445 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 HDAC11Q96DB2 347 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 NXPE2Q96DL1 559 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SCRN2Q96FV2 425 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 AGAP3Q96P47 875 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TSGA13Q96PP4 275 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SMIM14Q96QK8 99 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 LGR4Q9BXB1 951 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 TDRD1Q9BXT4 1180 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 KCNF1Q9H3M0 494 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PCDH9Q9HC56 1237 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CYP4F12Q9HCS2 524 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 MRPL40Q9NQ50 206 aaKnown RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PHPT1Q9NRX4 125 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 NCKIPSDQ9NZQ3 722 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SAE1Q9UBE0 346 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 METRNQ9UJH8 293 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 PNMA8BQ9ULN7 279 aaPredicted RBP6.51□□□□□ -1.37
KDM3B-208ENST00000512928 GPR34Q9UPC5 381 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 CSNK1G3Q9Y6M4 447 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 SHROOM3Q8TF72 1996 aa6.51□□□□□ -1.37
KDM3B-208ENST00000512928 A0A0J9YYE9 177 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 C1orf232A0A0U1RR37 186 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 TMEM202A6NGA9 273 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CAPN8A6NHC0 703 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 C3orf70A6NLC5 250 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 CYSRT1A8MQ03 144 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 GOLGA6L6A8MZA4 724 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 B4DGG1 531 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 LMO7DNF2Z398 122 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
KDM3B-208ENST00000512928 TPP1O14773 563 aa6.5□□□□□ -1.37
KDM3B-208ENST00000512928 INPP4BO15327 924 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms