RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ARCQ7LC44 396 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 TIPARPQ7Z3E1 657 aaKnown RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 NRROSQ86YC3 692 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 FAM114A1Q8IWE2 563 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 NAGSQ8N159 534 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 ESX1Q8N693 406 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 SLC38A3Q99624 504 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 TMEM9Q9P0T7 183 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 LHX3Q9UBR4 397 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 TMEM59LQ9UK28 342 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 POLHQ9Y253 713 aa12.57□□□□□ -0.4
DDX41-215ENST00000512431 TMEM184BQ9Y519 407 aaPredicted RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 SPTAN1Q13813 2472 aaKnown RBP12.57□□□□□ -0.4
DDX41-215ENST00000512431 UNC79Q9P2D8 2635 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 FAM72CH0Y354 149 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 K7EM74 188 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
DDX41-215ENST00000512431 POLR1CO15160 346 aaPredicted RBP12.56□□□□□ -0.4
DDX41-215ENST00000512431 EPHB2P29323 1055 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 SDC4P31431 198 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 CSF2RBP32927 897 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 CDH5P33151 784 aaPredicted RBP12.56□□□□□ -0.4
DDX41-215ENST00000512431 STX17P56962 302 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 APBA1Q02410 837 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 ERV3-1Q14264 604 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 CYTH1Q15438 398 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 PARP15Q460N3 678 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 FAM72AQ5TYM5 149 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 FAM72DQ6L9T8 149 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 TRNP1Q6NT89 227 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 PHLDB2Q86SQ0 1253 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 FAM72BQ86X60 149 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 CAMK1DQ8IU85 385 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 PATE1Q8WXA2 126 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 KCTD5Q9NXV2 234 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 PDP2Q9P2J9 529 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 MAN1B1Q9UKM7 699 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 SUFUQ9UMX1 484 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 RPS6KL1Q9Y6S9 549 aa12.56□□□□□ -0.4
DDX41-215ENST00000512431 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 FAM170AA1A519 330 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 RASA4BC9J798 803 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 RASA4O43374 803 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 BUB1BO60566 1050 aaPredicted RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 SEMA7AO75326 666 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 CEACAM5P06731 702 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 BMP6P22004 513 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 DLSTP36957 453 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 ACTR1BP42025 376 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 STAT5AP42229 794 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 ACTR1AP61163 376 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 CTBSQ01459 385 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 BCL2L1Q07817 233 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 RALGDSQ12967 914 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 PAK1Q13153 545 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 MAP7Q14244 749 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 C15orf59Q2T9L4 293 aaPredicted RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 AFMIDQ63HM1 303 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 EMC1Q8N766 993 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 NUS1Q96E22 293 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 KLC2Q9H0B6 622 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 CATSPERBQ9H7T0 1116 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 CASS4Q9NQ75 786 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 METTL5Q9NRN9 209 aaKnown RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 TLK1Q9UKI8 766 aa12.55□□□□□ -0.4
DDX41-215ENST00000512431 MRPS18BQ9Y676 258 aaKnown RBP12.55□□□□□ -0.4
DDX41-215ENST00000512431 NBASA2RRP1 2371 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
DDX41-215ENST00000512431 GOLGA6CA6NDK9 693 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 GOLGA6BA6NDN3 693 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 A8MX80 341 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 KATNA1O75449 491 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
DDX41-215ENST00000512431 GOLGA6DP0CG33 693 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 PON1P27169 355 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 ADCY8P40145 1251 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 CSNK1DP48730 415 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 TAF3Q5VWG9 929 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
DDX41-215ENST00000512431 DPPA4Q7L190 304 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 STRADAQ7RTN6 431 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 SRLQ86TD4 932 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 ZSWIM9Q86XI8 627 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 FAM71AQ8IYT1 594 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 NCSTNQ92542 709 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
DDX41-215ENST00000512431 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms