RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 DNAJC14Q6Y2X3 702 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ZBTB49Q6ZSB9 765 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 GPRIN3Q6ZVF9 776 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ARPINQ7Z6K5 226 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ATL1Q8WXF7 558 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 RNPEPL1Q9HAU8 725 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 TDRKHQ9Y2W6 561 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 PCDHB1Q9Y5F3 818 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 CXorf49A8MYA2 514 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 TK2O00142 265 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 INPP4BO15327 924 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC25A14O95258 325 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 RPN2P04844 631 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 GATMP50440 423 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC20A2Q08357 652 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 RFTN1Q14699 578 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 CNSTQ6PJW8 725 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 IZUMO2Q6UXV1 221 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 RPL10LQ96L21 214 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SIGLEC10Q96LC7 697 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 KCTD14Q9BQ13 255 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 TNKS2Q9H2K2 1166 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF556Q9HAH1 456 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 BLOC1S6Q9UL45 172 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SCN9AQ15858 1988 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 GLYATL1P3A0A0U1RQE8 302 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 A0A1W2PQ67 120 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 FTH1P02794 183 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 MPSTP25325 297 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ARL4DP49703 201 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF252P-AS1Q0IIN9 211 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 EML3Q32P44 896 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 RAET1GQ6H3X3 334 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CUZD1Q86UP6 607 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 PACS2Q86VP3 889 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ACDQ96AP0 544 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 FEM1CQ96JP0 617 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 GPR21Q99679 349 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 C1QTNF7Q9BXJ2 289 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 GPR62Q9BZJ7 368 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ILVBLA1L0T0 632 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 C16orf96A6NNT2 1141 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 F8W810 466 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 J3KR12 359 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 OTCP00480 354 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ELFN1P0C7U0 828 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 NEK3P51956 506 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CYP4F8P98187 520 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CDC16Q13042 620 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 PDE1CQ14123 709 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 RELL1Q8IUW5 271 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CENPLQ8N0S6 344 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 FSTL5Q8N475 847 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC2A13Q96QE2 648 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 NCKAP1Q9Y2A7 1128 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 FFAR3O14843 346 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 GPR42O15529 346 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 GOT2P00505 430 aaKnown RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 S100A3P33764 101 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 SIX1Q15475 284 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 TBCELQ5QJ74 424 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CYP2R1Q6VVX0 501 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC44A2Q8IWA5 706 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 HERPUD2Q9BSE4 406 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 KLHL4Q9C0H6 718 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC7A5P2Q9GIP4 190 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 CORO1CQ9ULV4 474 aaPredicted RBP13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 BTRCQ9Y297 605 aa13.11□□□□□ -0.31
PCDHA4-202ENST00000512229 ENTPD5O75356 428 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SH3BGRLO75368 114 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 POP4O95707 220 aaKnown RBP13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 IGFBP4P22692 258 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 SQLEQ14534 574 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 METTL21CQ5VZV1 264 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 PIGWQ7Z7B1 504 aa13.1□□□□□ -0.31
PCDHA4-202ENST00000512229 OR8D1Q8WZ84 308 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms