RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SOWAHCQ53LP3 525 aaPredicted RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 XKR9Q5GH70 373 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 NADSYN1Q6IA69 706 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 METTL2BQ6P1Q9 378 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 CYP20A1Q6UW02 462 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PQLC2Q6ZP29 291 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 CREB3L2Q70SY1 520 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 C16orf82Q7Z2V1 217 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 ARMC9Q7Z3E5 817 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PXKQ7Z7A4 578 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 ADSSL1Q8N142 457 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 SPATA6LQ8N4H0 392 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PPHLN1Q8NEY8 458 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 KCNG4Q8TDN1 519 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 NUDCD2Q8WVJ2 157 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 WASF1Q92558 559 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 MMABQ96EY8 250 aaPredicted RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 SCMH1Q96GD3 660 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 METTL2AQ96IZ6 378 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 FAM84BQ96KN1 310 aaPredicted RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 ZNF570Q96NI8 536 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 SH3GL2Q99962 352 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 TMEM47Q9BQJ4 181 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PDCL3Q9H2J4 239 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PPP1R3EQ9H7J1 279 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 KIF9Q9HAQ2 790 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 FBRSL1Q9HCM7 1045 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 LTB4R2Q9NPC1 389 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 NOX4Q9NPH5 578 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 HINT3Q9NQE9 182 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 OLA1Q9NTK5 396 aaKnown RBP2.92□□□□□ -1.94
GYPB-207ENST00000506679 OCIAD1Q9NX40 245 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 C1RLQ9NZP8 487 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 ERVK-11Q9UQG0 969 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 ADAM18Q9Y3Q7 739 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PSAT1Q9Y617 370 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 NFS1Q9Y697 457 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 PIAS3Q9Y6X2 628 aa2.92□□□□□ -1.94
GYPB-207ENST00000506679 FAM237AA0A1B0GTK4 181 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 hDV102S1A0JD36 115 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 PGPEP1LA6NFU8 196 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 SOCS6O14544 535 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 RFPL2O75678 378 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 BAIAP3O94812 1187 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 DDNO94850 711 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 CCNDBP1O95273 360 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 ZBTB11O95625 1053 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 DDX58O95786 925 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 SCGB1D1O95968 90 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 LINC00271P0C7V0 271 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 FGF3P11487 239 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 SRCP12931 536 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 DAOP14920 347 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 CDH2P19022 906 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 CAPN3P20807 821 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 STX2P32856 288 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 ART1P52961 327 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 RARSP54136 660 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 RPS3AP61247 264 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 SORDQ00796 357 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 CEBPZQ03701 1054 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 ILF3Q12906 894 aaKnown RBP eCLIP2.91□□□□□ -1.94
GYPB-207ENST00000506679 DLG1Q12959 904 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 EIF2S3LQ2VIR3 472 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 DPCR1Q3MIW9 517 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 ATP13A5Q4VNC0 1218 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 PAPPA-AS1Q5QFB9 102 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 SNX30Q5VWJ9 437 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 FAAH2Q6GMR7 532 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 KIAA1161Q6NSJ0 714 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 FAM180BQ6P0A1 224 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 NCEH1Q6PIU2 408 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 TSSK4Q6SA08 328 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 PRSS57Q6UWY2 283 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.91□□□□□ -1.94
GYPB-207ENST00000506679 DPPA4Q7L190 304 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 RSRC2Q7L4I2 434 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 TAOK1Q7L7X3 1001 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 TBC1D1Q86TI0 1168 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 HAPLN4Q86UW8 402 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 RBMXL3Q8N7X1 1067 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 CREB3L4Q8TEY5 395 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 HDAC2Q92769 488 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 KRTAP1-5Q9BYS1 174 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 IFIH1Q9BYX4 1025 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 MAF1Q9H063 256 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 DDX31Q9H8H2 851 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 PCDH9Q9HC56 1237 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 CNGB3Q9NQW8 809 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 IRAK4Q9NWZ3 460 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 ORC3Q9UBD5 711 aaPredicted RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 AASSQ9UDR5 926 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 LIMA1Q9UHB6 759 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 RCOR1Q9UKL0 485 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 KCNE2Q9Y6J6 123 aa2.91□□□□□ -1.94
GYPB-207ENST00000506679 ATXN2Q99700 1313 aaKnown RBP2.91□□□□□ -1.94
GYPB-207ENST00000506679 A0A1B0GUV1 79 aa2.9□□□□□ -1.95
GYPB-207ENST00000506679 PAPSS2O95340 614 aaPredicted RBP2.9□□□□□ -1.95
GYPB-207ENST00000506679 SPARCP09486 303 aa2.9□□□□□ -1.95
GYPB-207ENST00000506679 HSPA1AP0DMV8 641 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms