RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 A8MX80 341 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 AKR1B15C9JRZ8 316 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 CACNB4O00305 520 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TLX3O43711 291 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PRLP01236 227 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 HLA-DQB2P05538 268 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PDHA1P08559 390 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 ALPIP09923 528 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 CYP2A6P11509 494 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 CCNB1P14635 433 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 MX2P20592 715 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TGM2P21980 687 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 CES1P23141 567 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 NFKBIAP25963 317 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TEAD1P28347 426 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 DSC2Q02487 901 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 ACOX1Q15067 660 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PTPRRQ15256 657 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 ELOCQ15369 112 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 NR0B2Q15466 257 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PERM1Q5SV97 790 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 SLC9A4Q6AI14 798 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 EFL1Q7Z2Z2 1120 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 HSD11B1LQ7Z5J1 315 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TECPR1Q7Z6L1 1165 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TSPAN33Q86UF1 283 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PAF1Q8N7H5 531 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TC2NQ8N9U0 490 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 OR56A4Q8NGH8 313 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TPCN2Q8NHX9 752 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PDCD6IPQ8WUM4 868 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 OR1E3Q8WZA6 343 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 NAT6Q93015 286 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 NUS1Q96E22 293 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 DTD2Q96FN9 168 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 DEPDC7Q96QD5 511 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 LGR4Q9BXB1 951 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 TEX101Q9BY14 249 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 WDR26Q9H7D7 661 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PCDHB1Q9Y5F3 818 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 RAI2Q9Y5P3 530 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 LAMA5O15230 3695 aa9.08□□□□□ -0.96
PDLIM5-209ENST00000506632 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A0J9YYE9 177 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 PRSS38A1L453 326 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CPED1A4D0V7 1026 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 LRRD1A4D1F6 860 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 NTN3O00634 580 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CSO75390 466 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 SOD1P00441 154 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 TNFP01375 233 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 TRBC1P01850 177 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 MYCLP1P12525 358 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CTSEP14091 401 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF30P17039 623 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 KELP23276 732 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 ETV3P41162 512 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 SLC1A1P43005 524 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 RPIAP49247 311 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 HADHBP55084 474 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 IFI35P80217 286 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 DPTQ07507 201 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 PPIDQ08752 370 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 NIPAL4Q0D2K0 466 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 ISXQ2M1V0 245 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 OGFOD3Q6PK18 319 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CRTC1Q6UUV9 634 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 Q6ZVL8 140 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 USP45Q70EL2 814 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 GKN2Q86XP6 184 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CCDC13Q8IYE1 715 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 CNTD1Q8N815 330 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 ARL10Q8N8L6 244 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 KYQ8NBH2 561 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 GPR156Q8NFN8 814 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 SNIP1Q8TAD8 396 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 MAPK15Q8TD08 544 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 LRRN4Q8WUT4 740 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 SCG3Q8WXD2 468 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 GLMNQ92990 594 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 OLFM3Q96PB7 478 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 SMIM14Q96QK8 99 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 LYSMD1Q96S90 227 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 LGMNQ99538 433 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 TDRD1Q9BXT4 1180 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 FRMD8Q9BZ67 464 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 MRPL40Q9NQ50 206 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 RBM22Q9NW64 420 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 PADI4Q9UM07 663 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 LHX6Q9UPM6 363 aa9.07□□□□□ -0.96
PDLIM5-209ENST00000506632 ARHGEF17Q96PE2 2063 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A0U1RQS6 177 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A1W2PNU3 283 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CAPN8A6NHC0 703 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 KCNK1O00180 336 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 PDE2AO00408 941 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CASC3O15234 703 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 NOBOXO60393 691 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 BRINP1O60477 761 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms