RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CCNYL1Q8N7R7 359 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 MRPL43Q8N983 215 aaKnown RBP12.21□□□□□ -0.45
LIN54-206ENST00000506560 CALML6Q8TD86 181 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 ZSWIM3Q96MP5 696 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 LRMDAQ9H2I8 198 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 LINC00597Q9H2U6 94 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 ZDHHC2Q9UIJ5 367 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 MED16Q9Y2X0 877 aa12.21□□□□□ -0.45
LIN54-206ENST00000506560 UBA6A0AVT1 1052 aaPredicted RBP12.21□□□□□ -0.46
LIN54-206ENST00000506560 CAPN14A8MX76 684 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 ZBTB14O43829 449 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 DIAPH2O60879 1101 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 ZNF821O75541 412 aaPredicted RBP12.21□□□□□ -0.46
LIN54-206ENST00000506560 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.46
LIN54-206ENST00000506560 GRK2P25098 689 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 HADHAP40939 763 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 CLCN4P51793 760 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 CLCN5P51795 746 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 FBXO48Q5FWF7 155 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 PPM1LQ5SGD2 360 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 HTR3DQ70Z44 454 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 ING5Q8WYH8 240 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 EXT2Q93063 718 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 VOPP1Q96AW1 172 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 PTERQ96BW5 349 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 PHF21BQ96EK2 531 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.46
LIN54-206ENST00000506560 ALG9Q9H6U8 611 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 COG4Q9H9E3 785 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 CATSPERZQ9NTU4 200 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 IKZF3Q9UKT9 509 aa12.21□□□□□ -0.46
LIN54-206ENST00000506560 TRAV19A0A0A6YYK7 116 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 MGRN1O60291 552 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 WISP3O95389 354 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 TSPAN8P19075 237 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 CRABP2P29373 138 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 HLA-FP30511 346 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 SKIV2L2P42285 1042 aaKnown RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 KDSRQ06136 332 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 PEX6Q13608 980 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 RFTN1Q14699 578 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 DGKKQ5KSL6 1271 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 LIPMQ5VYY2 423 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 RBM23Q86U06 439 aaKnown RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 ZSWIM9Q86XI8 627 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 RYBPQ8N488 228 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 PPP4R1Q8TF05 950 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 UBXN10Q96LJ8 280 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 RAD9AQ99638 391 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 SLC30A3Q99726 388 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 WWP1Q9H0M0 922 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 WDR55Q9H6Y2 383 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 ABCB8Q9NUT2 735 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 NLE1Q9NVX2 485 aaPredicted RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 FAM50BQ9Y247 325 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 LINC01553A4QN01 128 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 H3BMM5 538 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 NEMP1O14524 444 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 FMO4P31512 558 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 STC1P52823 247 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 PPIGQ13427 754 aaKnown RBP eCLIP12.2□□□□□ -0.46
LIN54-206ENST00000506560 DBN1Q16643 649 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 CCDC91Q7Z6B0 441 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 LONP2Q86WA8 852 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 POU5F2Q8N7G0 328 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 DCAF4L2Q8NA75 395 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 TSNARE1Q96NA8 513 aa12.2□□□□□ -0.46
LIN54-206ENST00000506560 MRPL46Q9H2W6 279 aaKnown RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
LIN54-206ENST00000506560 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 LRRC14BA6NHZ5 514 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 MEI4A8MW99 385 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 E9PBE3 544 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 KLHL41O60662 606 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 LYSMD3Q7Z3D4 306 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 PHTF2Q8N3S3 785 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TTC30BQ8N4P2 665 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.19□□□□□ -0.46
LIN54-206ENST00000506560 USP13Q92995 863 aaPredicted RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 CCDC106Q9BWC9 280 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 CDH19Q9H159 772 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 CERS4Q9HA82 394 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 G3BP2Q9UN86 482 aaKnown RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 FIS1Q9Y3D6 152 aa12.19□□□□□ -0.46
LIN54-206ENST00000506560 TYW5A2RUC4 315 aaKnown RBP12.19□□□□□ -0.46
LIN54-206ENST00000506560 FZD6O60353 706 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms