RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 C4orf50Q6ZRC1 276 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 IKBIPQ70UQ0 350 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 PGBD5Q8N414 524 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SPATA6LQ8N4H0 392 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 CLEC18CQ8NCF0 446 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 NEK9Q8TD19 979 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 ELP5Q8TE02 316 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 TMED6Q8WW62 240 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 USP6NLQ92738 828 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 PHF21BQ96EK2 531 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 LYZL4Q96KX0 146 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 TMEM68Q96MH6 324 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 TMEM47Q9BQJ4 181 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 TMEM204Q9BSN7 226 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SEZ6LQ9BYH1 1024 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 HIPK2Q9H2X6 1198 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 HINT3Q9NQE9 182 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 BLOC1S4Q9NUP1 217 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SEPT11Q9NVA2 429 aaKnown RBP4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 OCIAD1Q9NX40 245 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 SNX9Q9Y5X1 595 aa4.1□□□□□ -1.75
TOPBP1-204ENST00000505804 LIPT2A6NK58 231 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 NDUFS7O75251 213 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 FTCDO95954 541 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 PDLIM4P50479 330 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 EGR4Q05215 589 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 DDR1Q08345 913 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 LMOD3Q0VAK6 560 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 DHX34Q14147 1143 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 PAPPA-AS1Q5QFB9 102 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 C6orf141Q5SZD1 244 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 PLEKHA7Q6IQ23 1121 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 METTL2BQ6P1Q9 378 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 NEK10Q6ZWH5 1172 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 OR14L1PQ8NHC6 308 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 CREB3L4Q8TEY5 395 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 FAM216AQ8WUB2 273 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 ZKSCAN4Q969J2 545 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 METTL2AQ96IZ6 378 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 PPP1R13BQ96KQ4 1090 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 CSF3RQ99062 836 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 BARD1Q99728 777 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 KXD1Q9BQD3 176 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 HAUS8Q9BT25 410 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 MMTAG2Q9BU76 263 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 MUC13Q9H3R2 512 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 PLEKHA5Q9HAU0 1116 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 RANGRFQ9HD47 186 aaPredicted RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 NOX4Q9NPH5 578 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 CNGB3Q9NQW8 809 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 EIF2B3Q9NR50 452 aaKnown RBP4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 WNT16Q9UBV4 365 aa4.09□□□□□ -1.75
TOPBP1-204ENST00000505804 A0A0U1RQJ8 604 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 CPED1A4D0V7 1026 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 VCYO14598 125 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 DOK2O60496 412 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ZBED4O75132 1171 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 PTP4A3O75365 173 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 IPO7O95373 1038 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ACADMP11310 421 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 MAOAP21397 527 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 TNFRSF8P28908 595 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 CLCN3P51790 818 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ARF3P61204 181 aaPredicted RBP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ARF1P84077 181 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 NIPAL4Q0D2K0 466 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 GRSF1Q12849 480 aaKnown RBP eCLIP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 AMZ1Q400G9 498 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 XKR9Q5GH70 373 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 EFHC1Q5JVL4 640 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 HYIQ5T013 277 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 GGNBP1Q5YKI7 109 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 PDXDC1Q6P996 788 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 NCEH1Q6PIU2 408 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 SLC36A4Q6YBV0 504 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 PQLC2Q6ZP29 291 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 TAOK1Q7L7X3 1001 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 FOXRED2Q8IWF2 684 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ARHGAP12Q8IWW6 846 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 DSELQ8IZU8 1212 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 IGSF8Q969P0 613 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 SCMH1Q96GD3 660 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 ATXN2Q99700 1313 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 IFIH1Q9BYX4 1025 aaKnown RBP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 FTOQ9C0B1 505 aaKnown RBP eCLIP4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 PPP1R3EQ9H7J1 279 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 SLC28A3Q9HAS3 691 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 RRP7BPQ9NSQ0 103 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 HCFC1R1Q9NWW0 138 aa4.08□□□□□ -1.76
TOPBP1-204ENST00000505804 C1orf226A1L170 272 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 LACTBL1A8MY62 500 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 SOCS6O14544 535 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 TIPRLO75663 272 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 SLC25A12O75746 678 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 T-ENOLP0DO92 83 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 PLA2G2AP14555 144 aa4.07□□□□□ -1.76
TOPBP1-204ENST00000505804 PPARGP37231 505 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms