RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 TAAR2Q9P1P5 351 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 UBA2Q9UBT2 640 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 PLEKHB1Q9UF11 243 aaPredicted RBP6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 DACH1Q9UI36 760 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 MFHAS1Q9Y4C4 1052 aa6.91□□□□□ -1.3
NPIPB3-203ENST00000504841 NBASA2RRP1 2371 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 ARHGEF17Q96PE2 2063 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TRBV23OR9-2A0A075B6M9 112 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 LOC101059948A0A1B0GTJ6 334 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 A1L4Q6 167 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 PDE2AO00408 941 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 PES1O00541 588 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 BUB1BO60566 1050 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 FGF1P05230 155 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 THRAP10827 490 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 MYCLP1P12525 358 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 CCNB1P14635 433 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 SERPINA4P29622 427 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 MAPK9P45984 424 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 RGRP47804 291 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 LIMK2P53671 638 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 HDAC4P56524 1084 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 NOMO3P69849 1222 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 NRG1Q02297 640 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 KLRB1Q12918 225 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TRA2AQ13595 282 aaKnown RBP eCLIP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 CYTH1Q15438 398 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 CCDC14Q49A88 953 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 INO80DQ53TQ3 878 aaPredicted RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 SCYL2Q6P3W7 929 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 HEATR4Q86WZ0 1026 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 NRROSQ86YC3 692 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TEX19Q8NA77 164 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 OR4D9Q8NGE8 314 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM172AQ8WUF8 416 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 MIB2Q96AX9 1013 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 NUS1Q96E22 293 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 AHCYL2Q96HN2 611 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 CELF6Q96J87 481 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TIGD1Q96MW7 591 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 ASPSCR1Q9BZE9 553 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 TMEM51Q9NW97 253 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 KLHL3Q9UH77 587 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 FHOD1Q9Y613 1164 aa6.9□□□□□ -1.3
NPIPB3-203ENST00000504841 IGHV1OR21-1A0A087WYE8 117 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 GTPBP10A4D1E9 387 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 B4E171 279 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 J3KR12 359 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 K7EM74 188 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PPM1DO15297 605 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 CAPN5O15484 640 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 STK17BO94768 372 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 LSM8O95777 96 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PRKCSHP14314 528 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TCN2P20062 427 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 GNLYP22749 145 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TSPAN7P41732 249 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 ACTR1BP42025 376 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 STAT1P42224 750 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 COPB1P53618 953 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PRSS12P56730 875 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 YBEYP58557 167 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 RAB15P59190 212 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 ACTR1AP61163 376 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 BCL2L1Q07817 233 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 GRM3Q14832 879 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 NR1D2Q14995 579 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 AGERQ15109 404 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 CLPPQ16740 277 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TPD52L1Q16890 204 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PARP15Q460N3 678 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 HSP90AA4PQ58FG1 418 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 FHL5Q5TD97 284 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 RAET1GQ6H3X3 334 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 PNCKQ6P2M8 343 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 LIPIQ6XZB0 460 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 DPPA4Q7L190 304 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 STRADAQ7RTN6 431 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TIPARPQ7Z3E1 657 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SLFN11Q7Z7L1 901 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 C17orf82Q86X59 251 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 NAGSQ8N159 534 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TSEN2Q8NCE0 465 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SLC30A5Q8TAD4 765 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 FNIP1Q8TF40 1166 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SLC20A1Q8WUM9 679 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 RTP4Q96DX8 246 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 ZNF641Q96N77 438 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 OR2M4Q96R27 311 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 TUBGCP5Q96RT8 1024 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SLC38A3Q99624 504 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 SELENOOQ9BVL4 669 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 CINPQ9BW66 212 aaPredicted RBP6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 ATP13A3Q9H7F0 1226 aa6.89□□□□□ -1.31
NPIPB3-203ENST00000504841 CATSPERBQ9H7T0 1116 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms