RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CCL23P55773 120 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ENPEPQ07075 957 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 TARBP2Q15633 366 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNF671Q8TAW3 534 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 KCTD15Q96SI1 283 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 LYVE1Q9Y5Y7 322 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 PRR5-ARHGAP8B1AHC4 643 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 MDM4O15151 490 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 PAX7P23759 505 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 ARHGAP8P85298 464 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 LLGL2Q6P1M3 1020 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 FAM151BQ6UXP7 276 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC26A9Q7LBE3 791 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 C16orf62Q7Z3J2 963 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 GPR156Q8NFN8 814 aa16.55■□□□□ 0.24
PCDHA1-203ENST00000504120 C5orf60A6NFR6 353 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CYP3A5P20815 502 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 WARSP23381 471 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CTNNB1P35222 781 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNF540Q8NDQ6 660 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNF624Q9P2J8 865 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 PCDHB1Q9Y5F3 818 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ICAM3P32942 547 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 IL12RB1P42701 662 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 EIF2B2P49770 351 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ARHGAP22Q7Z5H3 698 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CPT1BQ92523 772 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 IL1BP01584 269 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 HIST1H2ABP04908 130 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 GSTT1P30711 240 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC7A2P52569 658 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 GPAT3Q53EU6 434 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 KLHL17Q6TDP4 642 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 LBX2Q6XYB7 198 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 HIST3H2AQ7L7L0 130 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 C12orf50Q8NA57 414 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 HIST1H2ACQ93077 130 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 GPSM3Q9Y4H4 160 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 MAFBQ9Y5Q3 323 aaPredicted RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 H7C0S8 307 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 MFSD11O43934 449 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 NRP2O60462 931 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 SERPINB7O75635 380 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 AMD1P17707 334 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 PTPN9P43378 593 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 HECTD2Q5U5R9 776 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 TAPT1Q6NXT6 567 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ISLR2Q6UXK2 745 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 LRRC57Q8N9N7 239 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 KBTBD8Q8NFY9 601 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CLP1Q92989 425 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 PDZD7Q9H5P4 517 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ARHGEF3Q9NR81 526 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ERGIC3Q9Y282 383 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 SAMHD1Q9Y3Z3 626 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC35G4P0C7Q5 338 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 CDH13P55290 713 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 FAM110CQ1W6H9 321 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 TCAIMQ8N3R3 496 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 TRIM63Q969Q1 353 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 C7orf26Q96N11 449 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 TMEM109Q9BVC6 243 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNF180Q9UJW8 692 aa16.54■□□□□ 0.24
PCDHA1-203ENST00000504120 IPO13O94829 963 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 RHOQP17081 205 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 OR1D2P34982 312 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 UGT2B15P54855 530 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 RGS1Q08116 209 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 AP5B1Q2VPB7 878 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 POM121L1PQ3SYA9 428 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 MOB2Q70IA6 237 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 NETO2Q8NC67 525 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 CCDC28BQ9BUN5 200 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 GBA3Q9H227 469 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 POLR1BQ9H9Y6 1135 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 MRPL39Q9NYK5 338 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 EHD3Q9NZN3 535 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 SLC25A14O95258 325 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 FGF19O95750 216 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 FOLH1Q04609 750 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 ADGRD1Q6QNK2 874 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 FAM180AQ6UWF9 173 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 AGMOQ6ZNB7 445 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 UXS1Q8NBZ7 420 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 CCNB1IP1Q9NPC3 277 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 PRMT5O14744 637 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 CCNCP24863 283 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 HTR1BP28222 390 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 GBE1Q04446 702 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 TAF10Q12962 218 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 AMIGO2Q86SJ2 522 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms