RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LRRC43Q8N309 656 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 PNPLA1Q8N8W4 532 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 ZC3H15Q8WU90 426 aaKnown RBP24.53■■□□□ 1.52
DDX41-202ENST00000503078 ARNT2Q9HBZ2 717 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 EGFL7Q9UHF1 273 aa24.53■■□□□ 1.52
DDX41-202ENST00000503078 SH3PXD2BA1X283 911 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 SLC26A3P40879 764 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 HERVK_113P63132 956 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 NFKB2Q00653 900 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 CTBSQ01459 385 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 ATP6AP1Q15904 470 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 VPS26BQ4G0F5 336 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 TWF2Q6IBS0 349 aaKnown RBP24.52■■□□□ 1.52
DDX41-202ENST00000503078 KDELC1Q6UW63 502 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 RBM12BQ8IXT5 1001 aaKnown RBP24.52■■□□□ 1.52
DDX41-202ENST00000503078 ERVK-6Q9BXR3 956 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 HIPK3Q9H422 1215 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 ACTR3BQ9P1U1 418 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 DNAJC15Q9Y5T4 150 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 RNF103-CHMP3A0A140T963 221 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 ANGPT2O15123 496 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 CDKN2DP55273 166 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 EIF4EBP2Q13542 120 aaPredicted RBP24.52■■□□□ 1.52
DDX41-202ENST00000503078 ZNF554Q86TJ5 538 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 MIER2Q8N344 545 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 OR13J1Q8NGT2 312 aa24.52■■□□□ 1.52
DDX41-202ENST00000503078 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.52■■□□□ 1.52
DDX41-202ENST00000503078 CENPNQ96H22 339 aaPredicted RBP24.52■■□□□ 1.52
DDX41-202ENST00000503078 PAGE1O75459 146 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 F2P00734 622 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 MYL3P08590 195 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 CAPN3P20807 821 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 HTR7P34969 479 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 SERPINH1P50454 418 aaKnown RBP24.51■■□□□ 1.51
DDX41-202ENST00000503078 CDH13P55290 713 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 SH3BP2P78314 561 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 MANEALQ5VSG8 457 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 MYLPFQ96A32 169 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 NPLQ9BXD5 320 aaPredicted RBP24.51■■□□□ 1.51
DDX41-202ENST00000503078 CMTM6Q9NX76 183 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 CDH7Q9ULB5 785 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 NYNRINQ9P2P1 1898 aaKnown RBP24.51■■□□□ 1.51
DDX41-202ENST00000503078 FXYD1O00168 92 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 IRAK2O43187 625 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 TPST1O60507 370 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 CCT8P50990 548 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 BRMS1LQ5PSV4 323 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 CMTR2Q8IYT2 770 aaKnown RBP24.51■■□□□ 1.51
DDX41-202ENST00000503078 MYRFLQ96LU7 910 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 CDC14AQ9UNH5 594 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 ZNF510Q9Y2H8 683 aa24.51■■□□□ 1.51
DDX41-202ENST00000503078 MRPL42Q9Y6G3 142 aaKnown RBP24.51■■□□□ 1.51
DDX41-202ENST00000503078 SEC24DO94855 1032 aaPredicted RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 C7P10643 843 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 SPRED1Q7Z699 444 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 ADGRG5Q8IZF4 528 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 SEPT8Q92599 483 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 ASB2Q96Q27 587 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 SLC25A51Q9H1U9 297 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 SLC38A7Q9NVC3 462 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 TBCCD1Q9NVR7 557 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 GID8Q9NWU2 228 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 PAPSS2O95340 614 aaPredicted RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 HNRNPCP07910 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
DDX41-202ENST00000503078 FGF4P08620 206 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 SLC6A2P23975 617 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 CAPRIN1Q14444 709 aaKnown RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 C16orf72Q14CZ0 275 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 IQSEC1Q6DN90 963 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 LDB1Q86U70 411 aaPredicted RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 GTF3C2Q8WUA4 911 aaPredicted RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 PTERQ96BW5 349 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 FCRL2Q96LA5 508 aaPredicted RBP24.5■■□□□ 1.51
DDX41-202ENST00000503078 DCUN1D5Q9BTE7 237 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 ATP13A1Q9HD20 1204 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 CD320Q9NPF0 282 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 C8orf4Q9NR00 106 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 FAIMQ9NVQ4 179 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 GIMAP2Q9UG22 337 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 OAZ3Q9UMX2 235 aa24.5■■□□□ 1.51
DDX41-202ENST00000503078 ZSCAN9O15535 394 aaPredicted RBP24.49■■□□□ 1.51
DDX41-202ENST00000503078 SLC7A4O43246 635 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 CDK14O94921 469 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 RASAL1O95294 804 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 OXTRP30559 389 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 CLCNKBP51801 687 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 AFMIDQ63HM1 303 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 ELMSAN1Q6PJG2 1045 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 Q6ZNX1 250 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 DPP9Q86TI2 863 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 MUC3BQ9H195 1237 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 ABHD16BQ9H3Z7 469 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 CXorf21Q9HAI6 301 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 PTGDR2Q9Y5Y4 395 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 TTC24A2A3L6 582 aaPredicted RBP24.49■■□□□ 1.51
DDX41-202ENST00000503078 PIP5K1BO14986 540 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 ARPC2O15144 300 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 DYNC1LI2O43237 492 aaPredicted RBP24.49■■□□□ 1.51
DDX41-202ENST00000503078 TREHO43280 583 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 S1PR4O95977 384 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms